RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 RNF169Q8NCN4 708 aa29.42■■■□□ 2.3
SMDT1-203ENST00000484235 NTPCRQ9BSD7 190 aaKnown RBP29.42■■■□□ 2.3
SMDT1-203ENST00000484235 PANK2Q9BZ23 570 aa29.42■■■□□ 2.3
SMDT1-203ENST00000484235 PCDHB2Q9Y5E7 798 aa29.42■■■□□ 2.3
SMDT1-203ENST00000484235 CCDC169A6NNP5 214 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 SFI1A8K8P3 1242 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 FGFR1P11362 822 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 ARF4P18085 180 aaPredicted RBP29.41■■■□□ 2.3
SMDT1-203ENST00000484235 GATMP50440 423 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 KRT85P78386 507 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 NUCB2P80303 420 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 CLP1Q92989 425 aaKnown RBP29.41■■■□□ 2.3
SMDT1-203ENST00000484235 C17orf80Q9BSJ5 609 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 CCDC113Q9H0I3 377 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 MTUS1Q9ULD2 1270 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 ODF2LQ9ULJ1 636 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 PCDHA7Q9UN72 937 aa29.41■■■□□ 2.3
SMDT1-203ENST00000484235 RBM19Q9Y4C8 960 aaKnown RBP29.41■■■□□ 2.3
SMDT1-203ENST00000484235 MYH15Q9Y2K3 1946 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 NPHP3-ACAD11A0A0J9YXS1 232 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 A0A1B0GUA9 196 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 PLS3P13797 630 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 ATF7P17544 494 aaPredicted RBP29.4■■■□□ 2.3
SMDT1-203ENST00000484235 PAN2Q504Q3 1202 aaKnown RBP29.4■■■□□ 2.3
SMDT1-203ENST00000484235 NAALADL2Q58DX5 795 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 UBXN11Q5T124 520 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 TMEM192Q8IY95 271 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 CPB2Q96IY4 423 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 KIFC3Q9BVG8 833 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 TMEM117Q9H0C3 514 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 KMT5AQ9NQR1 393 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 RWDD3Q9Y3V2 267 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 TRANK1O15050 2925 aa29.4■■■□□ 2.3
SMDT1-203ENST00000484235 TBKBP1A7MCY6 615 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 K7ERI5 159 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 ACKR2O00590 384 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 B4GALT5O43286 388 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 NCLP19338 710 aaKnown RBP29.39■■■□□ 2.3
SMDT1-203ENST00000484235 EPC2Q52LR7 807 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 SHC4Q6S5L8 630 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 MRPL10Q7Z7H8 261 aaKnown RBP29.39■■■□□ 2.3
SMDT1-203ENST00000484235 ABI1Q8IZP0 508 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 SPIRE2Q8WWL2 714 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 PPM1EQ8WY54 764 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 PGBD4Q96DM1 585 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 RNF19AQ9NV58 838 aa29.39■■■□□ 2.3
SMDT1-203ENST00000484235 EPOPA6NHQ4 379 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 PRKCBP05771 671 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 KRT18P05783 430 aaKnown RBP29.38■■■□□ 2.29
SMDT1-203ENST00000484235 LINC00271P0C7V0 271 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 BMPR1AP36894 532 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 STAT6P42226 847 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 SMTNP53814 917 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 PRPF4BQ13523 1007 aaKnown RBP29.38■■■□□ 2.29
SMDT1-203ENST00000484235 SV2BQ7L1I2 683 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 CNNM3Q8NE01 707 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 ATXN2LQ8WWM7 1075 aaKnown RBP29.38■■■□□ 2.29
SMDT1-203ENST00000484235 CASD1Q96PB1 797 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 REEP2Q9BRK0 252 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 LARSQ9P2J5 1176 aaKnown RBP29.38■■■□□ 2.29
SMDT1-203ENST00000484235 MRPL42Q9Y6G3 142 aaKnown RBP29.38■■■□□ 2.29
SMDT1-203ENST00000484235 PHLPP2Q6ZVD8 1323 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 CNTNAP2Q9UHC6 1331 aa29.38■■■□□ 2.29
SMDT1-203ENST00000484235 A0A087X0B3 334 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 RFXAPO00287 272 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 GIT2Q14161 759 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 CLLU1OSQ5K130 101 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 FBXO22Q8NEZ5 403 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 LEO1Q8WVC0 666 aaPredicted RBP29.37■■■□□ 2.29
SMDT1-203ENST00000484235 RSPH1Q8WYR4 309 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 SPATA32Q96LK8 384 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 TMEM134Q9H6X4 195 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 ARHGAP28Q9P2N2 729 aa29.37■■■□□ 2.29
SMDT1-203ENST00000484235 RB1P06400 928 aa29.36■■■□□ 2.29
SMDT1-203ENST00000484235 LIG1P18858 919 aa29.36■■■□□ 2.29
SMDT1-203ENST00000484235 CACNB1Q02641 598 aaPredicted RBP29.36■■■□□ 2.29
SMDT1-203ENST00000484235 SLC27A1Q6PCB7 646 aa29.36■■■□□ 2.29
SMDT1-203ENST00000484235 PDILTQ8N807 584 aa29.36■■■□□ 2.29
SMDT1-203ENST00000484235 EIF2AQ9BY44 585 aaKnown RBP29.36■■■□□ 2.29
SMDT1-203ENST00000484235 SCAND2PQ9GZW5 306 aaPredicted RBP29.36■■■□□ 2.29
SMDT1-203ENST00000484235 C5orf67F2Z3F1 127 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 ZNF131P52739 623 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 HELQQ8TDG4 1101 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 LPPQ93052 612 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 CHAMP1Q96JM3 812 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 ASB2Q96Q27 587 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 PARVGQ9HBI0 331 aa29.35■■■□□ 2.29
SMDT1-203ENST00000484235 TYW1Q9NV66 732 aaKnown RBP29.35■■■□□ 2.29
SMDT1-203ENST00000484235 SLC16A4O15374 487 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 FAM13AO94988 1023 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 POU3F3P20264 500 aaPredicted RBP29.34■■■□□ 2.29
SMDT1-203ENST00000484235 IGFBP4P22692 258 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 CTNNB1P35222 781 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 TMEM132AQ24JP5 1023 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 LONRF3Q496Y0 759 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 RESP18Q5W5W9 173 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 GLB1LQ6UWU2 654 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 MYCT1Q8N699 235 aa29.34■■■□□ 2.29
SMDT1-203ENST00000484235 SMG8Q8ND04 991 aaKnown RBP29.34■■■□□ 2.29
SMDT1-203ENST00000484235 PLVAPQ9BX97 442 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms