RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 STAMQ92783 540 aa12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 TCEANC2Q96MN5 208 aa12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 RPS6KC1Q96S38 1066 aa12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 RPP25Q9BUL9 199 aaKnown RBP12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 FAM217BQ9NTX9 383 aaPredicted RBP12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 MARCH5Q9NX47 278 aa12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 PCDHB2Q9Y5E7 798 aa12.25□□□□□ -0.45
SMARCC1-205ENST00000483847 ANHXE9PGG2 379 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 F8W810 466 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 EDIL3O43854 480 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 STBD1O95210 358 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 GLUD1P00367 558 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 POMCP01189 267 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 SOD2P04179 222 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 ALDH2P05091 517 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 URODP06132 367 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 SKIP12755 728 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 CDC27P30260 824 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 RAB27AP51159 221 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 ATXN1P54253 815 aaKnown RBP12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 MIA3Q5JRA6 1907 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 SYNE3Q6ZMZ3 975 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 GET4Q7L5D6 327 aaPredicted RBP12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 CATSPER4Q7RTX7 472 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 PATJQ8NI35 1801 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 URGCPQ8TCY9 931 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 NXPE3Q969Y0 559 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 HERC2P3Q9BVR0 1158 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 RHOBTB2Q9BYZ6 727 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 UNC45AQ9H3U1 944 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 SLC2A4RGQ9NR83 387 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 SEPT9Q9UHD8 586 aaPredicted RBP12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 FAN1Q9Y2M0 1017 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 PRG3Q9Y2Y8 225 aaPredicted RBP12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 NUMBLQ9Y6R0 609 aa12.24□□□□□ -0.45
SMARCC1-205ENST00000483847 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 IGKV6-21A0A0C4DH24 114 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 MSH4O15457 936 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 ZBTB43O43298 467 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 KINO60870 393 aaKnown RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 EFEMP2O95967 443 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 ADH1AP07327 375 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 CIITAP33076 1130 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 STARD6P59095 220 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 VARS2Q5ST30 1063 aaKnown RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 KIAA0319Q5VV43 1072 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 CYP26C1Q6V0L0 522 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 MRPL10Q7Z7H8 261 aaKnown RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 PALB2Q86YC2 1186 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 RNF168Q8IYW5 571 aaPredicted RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 REXO1Q8N1G1 1221 aaKnown RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 B3GALT6Q96L58 329 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 TMEM175Q9BSA9 504 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 NIFKQ9BYG3 293 aaKnown RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 ZMYND12Q9H0C1 365 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 NT5C3AQ9H0P0 336 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 RSAD1Q9HA92 442 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 PIDD1Q9HB75 910 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 AGPAT5Q9NUQ2 364 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 SUCLA2Q9P2R7 463 aaPredicted RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 NCDNQ9UBB6 729 aa12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 MTF2Q9Y483 593 aaPredicted RBP12.23□□□□□ -0.45
SMARCC1-205ENST00000483847 DOCK6Q96HP0 2047 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 GOLGA8AA7E2F4 631 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 GOLGA8BA8MQT2 603 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 GAS7O60861 476 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 PAPLNO95428 1278 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 GLUD2P49448 558 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 GPC5P78333 572 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 CDC42EP1Q00587 391 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 UBXN11Q5T124 520 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 SLC5A5Q92911 643 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 FGF14Q92915 247 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 FAM193BQ96PV7 902 aaPredicted RBP12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 MINDY3Q9H8M7 445 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 IFT122Q9HBG6 1241 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 RXFP1Q9HBX9 757 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 SPATA6Q9NWH7 488 aaPredicted RBP12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 STK39Q9UEW8 545 aa12.22□□□□□ -0.45
SMARCC1-205ENST00000483847 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 CACNA1GO43497 2377 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 ESYT2A0FGR8 921 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 DCDC2BA2VCK2 349 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 TGM5O43548 720 aa12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 MAFO75444 373 aaPredicted RBP12.21□□□□□ -0.45
SMARCC1-205ENST00000483847 HOXA11P31270 313 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms