RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TMEM169Q96HH4 297 aa20.11■□□□□ 0.81
ATG4B-221ENST00000483778 NAP1L4Q99733 375 aaKnown RBP20.11■□□□□ 0.81
ATG4B-221ENST00000483778 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
ATG4B-221ENST00000483778 PCDHA12Q9UN75 941 aa20.11■□□□□ 0.81
ATG4B-221ENST00000483778 C2orf16Q68DN1 1984 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 SKIP12755 728 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 EPCAMP16422 314 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 CA8P35219 290 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 TXKP42681 527 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 GUCY1B3Q02153 619 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 RNASELQ05823 741 aaKnown RBP20.1■□□□□ 0.81
ATG4B-221ENST00000483778 TRIM67Q6ZTA4 783 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 DDX53Q86TM3 631 aaKnown RBP20.1■□□□□ 0.81
ATG4B-221ENST00000483778 DIS3L2Q8IYB7 885 aaKnown RBP20.1■□□□□ 0.81
ATG4B-221ENST00000483778 ASAP3Q8TDY4 903 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 SLC22A17Q8WUG5 538 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 CPB2Q96IY4 423 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 FBXL18Q96ME1 805 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 EIF2AQ9BY44 585 aaKnown RBP20.1■□□□□ 0.81
ATG4B-221ENST00000483778 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
ATG4B-221ENST00000483778 MIOSQ9NXC5 875 aa20.1■□□□□ 0.81
ATG4B-221ENST00000483778 TMEM221A6NGB7 291 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 M0R296 226 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 POMCP01189 267 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 RAB27AP51159 221 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 CALCRLQ16602 461 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 PIGOQ8TEQ8 1089 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 MTRQ99707 1265 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 POMKQ9H5K3 350 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 HES2Q9Y543 173 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 PLXNA3P51805 1871 aa20.09■□□□□ 0.81
ATG4B-221ENST00000483778 KMT2EQ8IZD2 1858 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.08■□□□□ 0.81
ATG4B-221ENST00000483778 ASAP2O43150 1006 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 TSPAN1O60635 241 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 CTSAP10619 480 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 HOXB8P17481 243 aaPredicted RBP20.08■□□□□ 0.81
ATG4B-221ENST00000483778 ATP2B1P20020 1258 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 PTENP60484 403 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 RARS2Q5T160 578 aaKnown RBP20.08■□□□□ 0.81
ATG4B-221ENST00000483778 IER5LQ5T953 404 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 TAS1R1Q7RTX1 841 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 TCP11Q8WWU5 503 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 CASP10Q92851 521 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 PGBD4Q96DM1 585 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 RSAD1Q9HA92 442 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 PPME1Q9Y570 386 aa20.08■□□□□ 0.81
ATG4B-221ENST00000483778 PIEZO1Q92508 2521 aa20.08■□□□□ 0.8
ATG4B-221ENST00000483778 FSD2A1L4K1 749 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 F8W810 466 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 LYPLA2O95372 231 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 SSBP05455 408 aaKnown RBP eCLIP20.07■□□□□ 0.8
ATG4B-221ENST00000483778 SPATA31C1P0DKV0 1188 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
ATG4B-221ENST00000483778 ARL2P36404 184 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 CAPSQ13938 189 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 AMHR2Q16671 573 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 CDR2LQ86X02 465 aaPredicted RBP20.07■□□□□ 0.8
ATG4B-221ENST00000483778 EXOC8Q8IYI6 725 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 ADAM7Q9H2U9 754 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 DOCK6Q96HP0 2047 aa20.07■□□□□ 0.8
ATG4B-221ENST00000483778 TRIP11Q15643 1979 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 POTEMA6NI47 508 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 NRP1O14786 923 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 B4GALT5O43286 388 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 NEMFO60524 1076 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 SRGAP2BP0DMP2 458 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 GLRA2P23416 452 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 MBTD1Q05BQ5 628 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 PBXIP1Q96AQ6 731 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 BRMS1Q9HCU9 246 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 GPRC5CQ9NQ84 441 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 TSHZ2Q9NRE2 1034 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 IPPQ9Y573 584 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 IRAK3Q9Y616 596 aa20.06■□□□□ 0.8
ATG4B-221ENST00000483778 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
ATG4B-221ENST00000483778 LILRB3O75022 631 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 ALDH2P05091 517 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 MCM7P33993 719 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 RARRES1P49788 294 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 PTPN14Q15678 1187 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 MAEAQ7L5Y9 396 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 BMP8AQ7Z5Y6 402 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 ALYREFQ86V81 257 aaKnown RBP20.05■□□□□ 0.8
ATG4B-221ENST00000483778 IFNLR1Q8IU57 520 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-221ENST00000483778 URGCPQ8TCY9 931 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 ASIC4Q96FT7 647 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 MFSD14AQ96MC6 490 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 ZFP42Q96MM3 310 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 GAD1Q99259 594 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 SMOC2Q9H3U7 446 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 FAN1Q9Y2M0 1017 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 MTCL1Q9Y4B5 1905 aaKnown RBP20.05■□□□□ 0.8
ATG4B-221ENST00000483778 DENND4AQ7Z401 1863 aa20.05■□□□□ 0.8
ATG4B-221ENST00000483778 C2CD4DB7Z1M9 353 aa20.04■□□□□ 0.8
ATG4B-221ENST00000483778 INO80B-WBP1J3KQ70 363 aa20.04■□□□□ 0.8
ATG4B-221ENST00000483778 MED24O75448 989 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms