RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 REEP2Q9BRK0 252 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 KMT5AQ9NQR1 393 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 FAM105AQ9NUU6 356 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 ARHGAP28Q9P2N2 729 aa17.22■□□□□ 0.35
RPP40-206ENST00000483546 A0A1B0GUA9 196 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 LINC01553A4QN01 128 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 CCDC169A6NNP5 214 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
RPP40-206ENST00000483546 FAM13AO94988 1023 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 BTG3Q14201 252 aaPredicted RBP17.21■□□□□ 0.35
RPP40-206ENST00000483546 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
RPP40-206ENST00000483546 ZNF598Q86UK7 904 aaKnown RBP17.21■□□□□ 0.35
RPP40-206ENST00000483546 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 PGBD4Q96DM1 585 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 TGS1Q96RS0 853 aaKnown RBP17.21■□□□□ 0.35
RPP40-206ENST00000483546 TMEM117Q9H0C3 514 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 PARVGQ9HBI0 331 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 MTMR10Q9NXD2 777 aa17.21■□□□□ 0.35
RPP40-206ENST00000483546 LCHNA4D1U4 455 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 K7ERI5 159 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 N4BP3O15049 544 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 PRKCBP05771 671 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 ARF4P18085 180 aaPredicted RBP17.2■□□□□ 0.34
RPP40-206ENST00000483546 CMA1P23946 247 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 ERVK-21P61565 698 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 AMPD3Q01432 767 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 PRPF4BQ13523 1007 aaKnown RBP17.2■□□□□ 0.34
RPP40-206ENST00000483546 GIT2Q14161 759 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 E2F4Q16254 413 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
RPP40-206ENST00000483546 HACE1Q8IYU2 909 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 ABI1Q8IZP0 508 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 PDILTQ8N807 584 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
RPP40-206ENST00000483546 ZMYM2Q9UBW7 1377 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 A0A087X0B3 334 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 RAD51AP2Q09MP3 1159 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 SLC27A1Q6PCB7 646 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 Q7L0L9 218 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
RPP40-206ENST00000483546 CLP1Q92989 425 aaKnown RBP17.19■□□□□ 0.34
RPP40-206ENST00000483546 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 MRPL9Q9BYD2 267 aaKnown RBP17.19■□□□□ 0.34
RPP40-206ENST00000483546 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 SEL1LQ9UBV2 794 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 USP25Q9UHP3 1055 aa17.19■□□□□ 0.34
RPP40-206ENST00000483546 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 CARNS1A5YM72 827 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 MAPTP10636 758 aaKnown RBP17.18■□□□□ 0.34
RPP40-206ENST00000483546 ATF7P17544 494 aaPredicted RBP17.18■□□□□ 0.34
RPP40-206ENST00000483546 GAP43P17677 238 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 NCKAP1LP55160 1127 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 STRN3Q13033 797 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 TMEM132AQ24JP5 1023 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 UBXN11Q5T124 520 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 TMEM161BQ8NDZ6 487 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 DDX12PQ92771 950 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 MRPL4Q9BYD3 311 aaKnown RBP17.18■□□□□ 0.34
RPP40-206ENST00000483546 PANK2Q9BZ23 570 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 TRIM6Q9C030 488 aaPredicted RBP17.18■□□□□ 0.34
RPP40-206ENST00000483546 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 KBTBD4Q9NVX7 518 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 KIAA1671Q9BY89 1806 aa17.18■□□□□ 0.34
RPP40-206ENST00000483546 NPHP3-ACAD11A0A0J9YXS1 232 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 FAM237AA0A1B0GTK4 181 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 SLC16A4O15374 487 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 POLR2DO15514 142 aaKnown RBP17.17■□□□□ 0.34
RPP40-206ENST00000483546 B4GALT5O43286 388 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 TRAK2O60296 914 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 RB1P06400 928 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 DCAF4L1Q3SXM0 396 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 CNNM4Q6P4Q7 775 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 GLB1LQ6UWU2 654 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 FAM178BQ8IXR5 827 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 LRRC43Q8N309 656 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 DHX58Q96C10 678 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 CPB2Q96IY4 423 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 GAS2L1Q99501 681 aaPredicted RBP17.17■□□□□ 0.34
RPP40-206ENST00000483546 PLVAPQ9BX97 442 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 ST6GALNAC4Q9H4F1 302 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 RNF19AQ9NV58 838 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 TNFSF13BQ9Y275 285 aa17.17■□□□□ 0.34
RPP40-206ENST00000483546 MYMKA6NI61 221 aa17.16■□□□□ 0.34
RPP40-206ENST00000483546 TBKBP1A7MCY6 615 aa17.16■□□□□ 0.34
RPP40-206ENST00000483546 C5orf67F2Z3F1 127 aa17.16■□□□□ 0.34
RPP40-206ENST00000483546 ARHGEF15O94989 841 aa17.16■□□□□ 0.34
RPP40-206ENST00000483546 FGFR1P11362 822 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms