RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 GH1P01241 217 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TSPY3P0CV98 308 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TSPY8P0CW00 308 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 BRAFP15056 766 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 LMNB1P20700 586 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 PTDSS1P48651 473 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 JAM2P57087 298 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ECM1Q16610 540 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TCERG1LQ5VWI1 586 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 ENDOVQ8N8Q3 282 aaKnown RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 FAM13CQ8NE31 585 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 LNX1Q8TBB1 728 aaPredicted RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 MAGEB18Q96M61 343 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 MKNK2Q9HBH9 465 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 AJAP1Q9UKB5 411 aaPredicted RBP11.87□□□□□ -0.51
RPGR-208ENST00000482855 PCDHA2Q9Y5H9 948 aa11.87□□□□□ -0.51
RPGR-208ENST00000482855 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 USP17L8P0C7I0 530 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 RFC5P40937 340 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 STAT1P42224 750 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
RPGR-208ENST00000482855 MECOMQ03112 1051 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 RNASELQ05823 741 aaKnown RBP11.86□□□□□ -0.51
RPGR-208ENST00000482855 CCDC137Q6PK04 289 aaKnown RBP11.86□□□□□ -0.51
RPGR-208ENST00000482855 ARHGEF18Q6ZSZ5 1173 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 GLYCTKQ8IVS8 523 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 PRELID2Q8N945 189 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 ALG3Q92685 438 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 INPP5DQ92835 1189 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 ERP27Q96DN0 273 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 TMEM237Q96Q45 408 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 CDC42EP4Q9H3Q1 356 aaKnown RBP11.86□□□□□ -0.51
RPGR-208ENST00000482855 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 ACSL3O95573 720 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 TARSP26639 723 aaKnown RBP11.86□□□□□ -0.51
RPGR-208ENST00000482855 EPHA7Q15375 998 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 SUSD4Q5VX71 490 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 EZH1Q92800 747 aaPredicted RBP11.86□□□□□ -0.51
RPGR-208ENST00000482855 ART4Q93070 314 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 TMEM47Q9BQJ4 181 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 GORASP1Q9BQQ3 440 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 PITPNM3Q9BZ71 974 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 NKIRAS1Q9NYS0 192 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 GCNT4Q9P109 453 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
RPGR-208ENST00000482855 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 RNF8O76064 485 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 KRT18P05783 430 aaKnown RBP11.85□□□□□ -0.51
RPGR-208ENST00000482855 GM2AP17900 193 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 NT5C2P49902 561 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 POLGP54098 1239 aaPredicted RBP11.85□□□□□ -0.51
RPGR-208ENST00000482855 POLE2P56282 527 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 STRN3Q13033 797 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 CALCOCO2Q13137 446 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 CUL3Q13618 768 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
RPGR-208ENST00000482855 WASHC2DQ5SRD0 308 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 RNF220Q5VTB9 566 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 IRGCQ6NXR0 463 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 AADACL2Q6P093 401 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 TTC27Q6P3X3 843 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 LONP2Q86WA8 852 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 CCDC105Q8IYK2 499 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 RBBP8NLQ8NC74 664 aaPredicted RBP11.85□□□□□ -0.51
RPGR-208ENST00000482855 B4GALNT2Q8NHY0 566 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 SLC30A5Q8TAD4 765 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 KIFAP3Q92845 792 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 SIX2Q9NPC8 291 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 PCDHA3Q9Y5H8 950 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 KCNQ2O43526 872 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 MARCH6O60337 910 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 EYA4O95677 639 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 TTLL1O95922 423 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 CTNNA2P26232 953 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 FAM47EQ6ZV65 393 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 GPBP1Q86WP2 473 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 NT5C3AQ9H0P0 336 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.85□□□□□ -0.51
RPGR-208ENST00000482855 SCOCQ9UIL1 159 aa11.85□□□□□ -0.51
RPGR-208ENST00000482855 NPHP3-ACAD11A0A0J9YXS1 232 aa11.84□□□□□ -0.51
RPGR-208ENST00000482855 LMNAP02545 664 aaKnown RBP11.84□□□□□ -0.51
RPGR-208ENST00000482855 RASSF2P50749 326 aa11.84□□□□□ -0.51
RPGR-208ENST00000482855 MPP2Q14168 576 aa11.84□□□□□ -0.51
RPGR-208ENST00000482855 TBC1D25Q3MII6 688 aa11.84□□□□□ -0.51
RPGR-208ENST00000482855 ARHGAP22Q7Z5H3 698 aa11.84□□□□□ -0.51
RPGR-208ENST00000482855 NBPF5PQ86XG9 351 aaPredicted RBP11.84□□□□□ -0.51
RPGR-208ENST00000482855 PIGBQ92521 554 aa11.84□□□□□ -0.51
RPGR-208ENST00000482855 TRAPPC9Q96Q05 1148 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms