RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 EYA4O95677 639 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 ITGA4P13612 1032 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 ARF4P18085 180 aaPredicted RBP18.32■□□□□ 0.52
VAMP4-204ENST00000482519 IRS1P35568 1242 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 ALDH7A1P49419 539 aaKnown RBP18.32■□□□□ 0.52
VAMP4-204ENST00000482519 SF3A1Q15459 793 aaKnown RBP18.32■□□□□ 0.52
VAMP4-204ENST00000482519 RBM23Q86U06 439 aaKnown RBP18.32■□□□□ 0.52
VAMP4-204ENST00000482519 CDR2LQ86X02 465 aaPredicted RBP18.32■□□□□ 0.52
VAMP4-204ENST00000482519 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 URGCPQ8TCY9 931 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 ADAMTS19Q8TE59 1207 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 IFT74Q96LB3 600 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 APOL6Q9BWW8 343 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 GBP3Q9H0R5 595 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 CSRNP2Q9H175 543 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 CLDND1Q9NY35 253 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 PCDHGC5Q9Y5F6 944 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 NT5C1B-RDH14C9J2C7 533 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 ZC3H11AO75152 810 aaKnown RBP eCLIP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 BMP15O95972 392 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 GTF2F1P35269 517 aaKnown RBP eCLIP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 BCAR1P56945 870 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 KRT17Q04695 432 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 HYAL1Q12794 435 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 PPP2R5AQ15172 486 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 AMHR2Q16671 573 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 AGMOQ6ZNB7 445 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 KCNK18Q7Z418 384 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 SMG8Q8ND04 991 aaKnown RBP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 KIFAP3Q92845 792 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 PPP2R3CQ969Q6 453 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 CCDC51Q96ER9 411 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 KIFC3Q9BVG8 833 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 C2orf40Q9H1Z8 148 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 RSAD1Q9HA92 442 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 TLR9Q9NR96 1032 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 TBC1D13Q9NVG8 400 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 SPG21Q9NZD8 308 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
VAMP4-204ENST00000482519 HES2Q9Y543 173 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 IPPQ9Y573 584 aa18.31■□□□□ 0.52
VAMP4-204ENST00000482519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.3■□□□□ 0.52
VAMP4-204ENST00000482519 CCDC169A6NNP5 214 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 H3BQ06 376 aaPredicted RBP18.3■□□□□ 0.52
VAMP4-204ENST00000482519 NPTXRO95502 500 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 BMP1P13497 986 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
VAMP4-204ENST00000482519 PPM1AP35813 382 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 UBA7P41226 1012 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 NAMPTP43490 491 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 ERVFC1P60507 584 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 CEBPZQ03701 1054 aaKnown RBP18.3■□□□□ 0.52
VAMP4-204ENST00000482519 UBE3AQ05086 875 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 CDCA2Q69YH5 1023 aaPredicted RBP18.3■□□□□ 0.52
VAMP4-204ENST00000482519 FAM173BQ6P4H8 233 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 ADGRD2Q7Z7M1 963 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 CABP7Q86V35 215 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 CNNM3Q8NE01 707 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 RASSF8Q8NHQ8 419 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 SNX21Q969T3 373 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 PNMA5Q96PV4 448 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 USP20Q9Y2K6 914 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 CLIC4Q9Y696 253 aa18.3■□□□□ 0.52
VAMP4-204ENST00000482519 HIP1RO75146 1068 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 POMCP01189 267 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 NRIP1P48552 1158 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 AFF1P51825 1210 aaKnown RBP18.29■□□□□ 0.52
VAMP4-204ENST00000482519 RESTQ13127 1097 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 PRPF4BQ13523 1007 aaKnown RBP18.29■□□□□ 0.52
VAMP4-204ENST00000482519 MAPK6Q16659 721 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 RINT1Q6NUQ1 792 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 SLC27A1Q6PCB7 646 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 MRPS27Q92552 414 aaKnown RBP18.29■□□□□ 0.52
VAMP4-204ENST00000482519 PABPC5Q96DU9 382 aaKnown RBP18.29■□□□□ 0.52
VAMP4-204ENST00000482519 AK8Q96MA6 479 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 NECAB3Q96P71 396 aaPredicted RBP18.29■□□□□ 0.52
VAMP4-204ENST00000482519 FAM193BQ96PV7 902 aaPredicted RBP18.29■□□□□ 0.52
VAMP4-204ENST00000482519 NT5C3AQ9H0P0 336 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 FZD8Q9H461 694 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 TLE6Q9H808 572 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
VAMP4-204ENST00000482519 CNTNAP2Q9UHC6 1331 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 A0A1B0GUA9 196 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 LINC01565O15544 149 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 NCK2O43639 380 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 STX6O43752 255 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 PRKCBP05771 671 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 AKAP5P24588 427 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 CA8P35219 290 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 PEX3P56589 373 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 PLCB3Q01970 1234 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 GRIN1Q05586 938 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 PLPP4Q5VZY2 271 aa18.28■□□□□ 0.52
VAMP4-204ENST00000482519 ZNF280BQ86YH2 543 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms