RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CLRN2A0PK11 232 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 FTLP02792 175 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-218ENST00000482056 ICAM1P05362 532 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 EPC2Q52LR7 807 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 SEL1L2Q5TEA6 688 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 DUPD1Q68J44 220 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 RUNDC3BQ96NL0 473 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 RPS6KC1Q96S38 1066 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 TRIM51Q9BSJ1 452 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 TRIM31Q9BZY9 425 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.24
C9orf3-218ENST00000482056 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 PARP2Q9UGN5 583 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 ALG6Q9Y672 507 aa16.58■□□□□ 0.24
C9orf3-218ENST00000482056 PMM2O15305 246 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 TBC1D12O60347 775 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 PHF2O75151 1096 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 CHRNA3P32297 505 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 FLT3P36888 993 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 DRG2P55039 364 aaKnown RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 RSBN1LQ6PCB5 846 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 MAEAQ7L5Y9 396 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 HSPBP1Q9NZL4 362 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 COG5Q9UP83 839 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ATP8A1Q9Y2Q0 1164 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 RPTORQ8N122 1335 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 YDJCA8MPS7 323 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 PODXLO00592 558 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ITGB5P18084 799 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 VCAM1P19320 739 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 QARSP47897 775 aaKnown RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 GCLMP48507 274 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 MXI1P50539 228 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 CROCCP2Q86T23 111 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 JAMLQ86YT9 394 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ARHGEF19Q8IW93 802 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 SLC20A1Q8WUM9 679 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ZSWIM1Q9BR11 485 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 WNT8AQ9H1J5 351 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ST6GALNAC4Q9H4F1 302 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 PPANQ9NQ55 473 aaKnown RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 PKD2L1Q9P0L9 805 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 NOVA2Q9UNW9 492 aaKnown RBP16.57■□□□□ 0.24
C9orf3-218ENST00000482056 EXOC7Q9UPT5 735 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
C9orf3-218ENST00000482056 GMNCA6NCL1 334 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 LYPLA2O95372 231 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 APBA3O96018 575 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 GZMAP12544 262 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 CHRNA5P30532 468 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 USP8P40818 1118 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 RARRES1P49788 294 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 MFAP3P55082 362 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 DLG4P78352 724 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 PPP3CAQ08209 521 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 ZNF211Q13398 564 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-218ENST00000482056 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 FKBP1CQ5VVH2 108 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-218ENST00000482056 PALB2Q86YC2 1186 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 ATP8B4Q8TF62 1192 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 PSMD1Q99460 953 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 SLC12A6Q9UHW9 1150 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
C9orf3-218ENST00000482056 TMEM110-MUSTN1A8MSY1 372 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 MTA2O94776 668 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 CAP2P40123 477 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 SEC24CP53992 1094 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 GTF2BQ00403 316 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 SPDYE2Q495Y8 402 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 HAUS6Q7Z4H7 955 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 ADAT2Q7Z6V5 191 aaKnown RBP16.55■□□□□ 0.24
C9orf3-218ENST00000482056 ALG3Q92685 438 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 CBWD1Q9BRT8 395 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 TAOK3Q9H2K8 898 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 AGO4Q9HCK5 861 aaKnown RBP16.55■□□□□ 0.24
C9orf3-218ENST00000482056 MTRF1LQ9UGC7 380 aaKnown RBP16.55■□□□□ 0.24
C9orf3-218ENST00000482056 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 ASNSP08243 561 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 PTGER2P43116 358 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 PMS2P54278 862 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 PCNX4Q63HM2 1172 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 DENND2CQ68D51 928 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 TXLNGYQ9BZA5 131 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 VEZTQ9HBM0 779 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 ZDHHC18Q9NUE0 388 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 TMOD4Q9NZQ9 345 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 PCYOX1Q9UHG3 505 aa16.55■□□□□ 0.24
C9orf3-218ENST00000482056 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms