RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 SOX10P56693 466 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 MYL7Q01449 175 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 TFDP1Q14186 410 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 SPA17Q15506 151 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 MYRIPQ8NFW9 859 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 NPLOC4Q8TAT6 608 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 PSPC1Q8WXF1 523 aaKnown RBP12.74□□□□□ -0.37
GGPS1-205ENST00000482013 SOCS4Q8WXH5 440 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 POMGNT1Q8WZA1 660 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 DESI2Q9BSY9 194 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 SIX2Q9NPC8 291 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 ARHGAP20Q9P2F6 1191 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 ZBTB42B2RXF5 422 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 HNRNPDLO14979 420 aaKnown RBP12.73□□□□□ -0.37
GGPS1-205ENST00000482013 CCDC172P0C7W6 258 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■■■■□ 26
GGPS1-205ENST00000482013 ADCYAP1R1P41586 468 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 LIG4P49917 911 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 TUBB2AQ13885 445 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
GGPS1-205ENST00000482013 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-205ENST00000482013 SLC39A4Q6P5W5 647 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 ZPBP2Q6X784 338 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 SYT10Q6XYQ8 523 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 ZBTB8OSQ8IWT0 167 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 BICD1Q96G01 975 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 TUBB2BQ9BVA1 445 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 NFKBIZQ9BYH8 718 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 NLRC4Q9NPP4 1024 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 LUC7LQ9NQ29 371 aaKnown RBP12.73□□□□□ -0.37
GGPS1-205ENST00000482013 ZNF215Q9UL58 517 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-205ENST00000482013 TRPC6Q9Y210 931 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 Q9Y3F1 56 aa12.73□□□□□ -0.37
GGPS1-205ENST00000482013 ATP8B3O60423 1300 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ZNF233A6NK53 670 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 RBAK-RBAKDNI3L0D1 243 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 CA12O43570 354 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 KRT86O43790 486 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 EXTL3O43909 919 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 KIF5CO60282 957 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 GFPT2O94808 682 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 SMPD1P17405 629 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 MARK3P27448 753 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
GGPS1-205ENST00000482013 RGS2P41220 211 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 PRKCIP41743 596 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 JAM2P57087 298 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 CYP24A1Q07973 514 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 CAPSQ13938 189 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ASIC2Q16515 512 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 DGKDQ16760 1214 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ASTE1Q2TB18 679 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-205ENST00000482013 EPC2Q52LR7 807 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-205ENST00000482013 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ACRBPQ8NEB7 543 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 PRPF31Q8WWY3 499 aaKnown RBP12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ZNF592Q92610 1267 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 STK33Q9BYT3 514 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 INTS2Q9H0H0 1204 aaKnown RBP12.72□□□□□ -0.37
GGPS1-205ENST00000482013 DEF6Q9H4E7 631 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 COQ4Q9Y3A0 265 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 REXO2Q9Y3B8 237 aaKnown RBP12.72□□□□□ -0.37
GGPS1-205ENST00000482013 MGAMO43451 1857 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
GGPS1-205ENST00000482013 DOCK3Q8IZD9 2030 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 RRN3P2A6NIE6 340 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 TISP43B9A030 160 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 AKR1B10O60218 316 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 C22orf31O95567 290 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 IGHA2P01877 340 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 ADRB2P07550 413 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 TRIM49P0CI25 452 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 TRIM49CP0CI26 452 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 ACTN1P12814 892 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 FERP16591 822 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 CASQ1P31415 396 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 STAT1P42224 750 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 ARHGAP25P42331 645 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 KIF11P52732 1056 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 VAV2P52735 878 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 GNG11P61952 73 aa12.71□□□□□ -0.37
GGPS1-205ENST00000482013 CLDN10P78369 228 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms