RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 INO80B-WBP1J3KQ70 363 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 K7ERI5 159 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 KIF1CO43896 1103 aaKnown RBP12.73□□□□□ -0.37
HPS4-212ENST00000481910 SELPP16109 830 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 EIF4BP23588 611 aaKnown RBP12.73□□□□□ -0.37
HPS4-212ENST00000481910 EFNA5P52803 228 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 RBL2Q08999 1139 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 MYBPC2Q14324 1141 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 FAM26DQ5JW98 314 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 ZNF658Q5TYW1 1059 aaPredicted RBP12.73□□□□□ -0.37
HPS4-212ENST00000481910 LRRC8DQ7L1W4 858 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 SRGAP1Q7Z6B7 1085 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 TRIML1Q8N9V2 468 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 TMEM161BQ8NDZ6 487 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 FAM210AQ96ND0 272 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 NFKBIZQ9BYH8 718 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 INO80BQ9C086 356 aaPredicted RBP12.73□□□□□ -0.37
HPS4-212ENST00000481910 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 TBX21Q9UL17 535 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
HPS4-212ENST00000481910 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 CASP5P51878 434 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 MGAT3Q09327 533 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 MORC3Q14149 939 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 CDCA2Q69YH5 1023 aaPredicted RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 SASS6Q6UVJ0 657 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 GLIS3Q8NEA6 775 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 FGFBP2Q9BYJ0 223 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 MINDY3Q9H8M7 445 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 NUB1Q9Y5A7 615 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 UMODL1Q5DID0 1318 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 SYCE3A1L190 88 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 EVI5O60447 810 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 MYBP10242 640 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 SCP2P22307 547 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 CYP2C18P33260 490 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 ABCD1P33897 745 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 CCL23P55773 120 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 GTF2BQ00403 316 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 STRN3Q13033 797 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 MAPK6Q16659 721 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 SMYD4Q8IYR2 804 aaPredicted RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 DPF3Q92784 378 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
HPS4-212ENST00000481910 MAPK8IP1Q9UQF2 711 aa12.72□□□□□ -0.37
HPS4-212ENST00000481910 TRIM43BA6NCK2 446 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 PRPF6O94906 941 aaKnown RBP12.71□□□□□ -0.37
HPS4-212ENST00000481910 RAG1P15918 1043 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 BMP6P22004 513 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 ALCAMQ13740 583 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 ITFG2Q969R8 447 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 TRIM43Q96BQ3 446 aaPredicted RBP12.71□□□□□ -0.37
HPS4-212ENST00000481910 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 TBX20Q9UMR3 447 aa12.71□□□□□ -0.37
HPS4-212ENST00000481910 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
HPS4-212ENST00000481910 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 PPP1R37O75864 691 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 ERLIN2O94905 339 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 TIMP1P01033 207 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 GHRP10912 638 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 FGFR4P22455 802 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
HPS4-212ENST00000481910 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 KCNA1Q09470 495 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 EPM2AIP1Q7L775 607 aaPredicted RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 TAS1R3Q7RTX0 852 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 SCFD1Q8WVM8 642 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 SCLYQ96I15 445 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 NCAPGQ9BPX3 1015 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 CCDC113Q9H0I3 377 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 FZD8Q9H461 694 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 NOC2LQ9Y3T9 749 aaKnown RBP12.7□□□□□ -0.38
HPS4-212ENST00000481910 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 SIP14410 1827 aa12.7□□□□□ -0.38
HPS4-212ENST00000481910 GPR182O15218 404 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms