RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 RSAD1Q9HA92 442 aa26.12■■□□□ 1.77
TTC3-217ENST00000481605 SH2B1Q9NRF2 756 aaPredicted RBP26.12■■□□□ 1.77
TTC3-217ENST00000481605 CARNS1A5YM72 827 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 INO80B-WBP1J3KQ70 363 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 GALTP07902 379 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 SPATA31C1P0DKV0 1188 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 CA8P35219 290 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 ARL2P36404 184 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 TECP42680 631 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 PCBP1Q15365 356 aaKnown RBP eCLIP26.11■■□□□ 1.77
TTC3-217ENST00000481605 ZNF174Q15697 407 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 VPS52Q8N1B4 723 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 FAM184AQ8NB25 1140 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 DNAJB4Q9UDY4 337 aa26.11■■□□□ 1.77
TTC3-217ENST00000481605 C2orf71A6NGG8 1288 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 TSPAN1O60635 241 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 XRCC6P12956 609 aaKnown RBP eCLIP26.1■■□□□ 1.773e-6■■□□□ 14.4
TTC3-217ENST00000481605 POU5F1BQ06416 359 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 CAPSQ13938 189 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 BMS1Q14692 1282 aaKnown RBP26.1■■□□□ 1.77
TTC3-217ENST00000481605 ANKRD54Q6NXT1 300 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 CATSPER3Q86XQ3 398 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 ZNF280BQ86YH2 543 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 IGSF21Q96ID5 467 aa26.1■■□□□ 1.77
TTC3-217ENST00000481605 USO1O60763 962 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 CXCL14O95715 111 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 AXLP30530 894 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 RBM25P49756 843 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 AFF1P51825 1210 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 NCBP1Q09161 790 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 GNL2Q13823 731 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 IFNLR1Q8IU57 520 aaPredicted RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 RNF135Q8IUD6 432 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 CPB2Q96IY4 423 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 TUFT1Q9NNX1 390 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 CNTNAP2Q9UHC6 1331 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 PRR33A8MZF0 331 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 B4GALT3O60512 393 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 MED24O75448 989 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 OR52Z1P0C646 297 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 NCLP19338 710 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 GLRA2P23416 452 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 SLC11A1P49279 550 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 MBTD1Q05BQ5 628 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 ORC2Q13416 577 aaPredicted RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 NOTUMQ6P988 496 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 SMG8Q8ND04 991 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 BCL7CQ8WUZ0 217 aaPredicted RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 SUSD6Q92537 303 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 EIF2AQ9BY44 585 aaKnown RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 ZBP1Q9H171 429 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 POLR3FQ9H1D9 316 aaPredicted RBP26.09■■□□□ 1.77
TTC3-217ENST00000481605 S1PR5Q9H228 398 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 KANSL3Q9P2N6 904 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 MUTYHQ9UIF7 546 aa26.09■■□□□ 1.77
TTC3-217ENST00000481605 DDHD2O94830 711 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 SYCE2Q6PIF2 218 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 MAEAQ7L5Y9 396 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 DDX53Q86TM3 631 aaKnown RBP26.08■■□□□ 1.77
TTC3-217ENST00000481605 NOSTRINQ8IVI9 506 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 CNNM3Q8NE01 707 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 APOL5Q9BWW9 433 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 PHF7Q9BWX1 381 aaPredicted RBP26.08■■□□□ 1.77
TTC3-217ENST00000481605 NFKBIZQ9BYH8 718 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 HCN4Q9Y3Q4 1203 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 IPPQ9Y573 584 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 HCFC2Q9Y5Z7 792 aa26.08■■□□□ 1.77
TTC3-217ENST00000481605 LOC730098B7Z3J9 87 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 ITGA4P13612 1032 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 TTC38Q5R3I4 469 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 AUTS2Q8WXX7 1259 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 CASP10Q92851 521 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 CCDC51Q96ER9 411 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 FAM193BQ96PV7 902 aaPredicted RBP26.07■■□□□ 1.76
TTC3-217ENST00000481605 POLR3CQ9BUI4 534 aaPredicted RBP26.07■■□□□ 1.76
TTC3-217ENST00000481605 UBN1Q9NPG3 1134 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 GPRC5CQ9NQ84 441 aa26.07■■□□□ 1.76
TTC3-217ENST00000481605 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.06■■□□□ 1.76
TTC3-217ENST00000481605 CLASP2O75122 1294 aaKnown RBP26.06■■□□□ 1.76
TTC3-217ENST00000481605 POMCP01189 267 aa26.06■■□□□ 1.76
TTC3-217ENST00000481605 HOXB8P17481 243 aaPredicted RBP26.06■■□□□ 1.76
TTC3-217ENST00000481605 AMHR2Q16671 573 aa26.06■■□□□ 1.76
TTC3-217ENST00000481605 HERC4Q5GLZ8 1057 aaPredicted RBP26.06■■□□□ 1.76
TTC3-217ENST00000481605 ERMNQ8TAM6 284 aa26.06■■□□□ 1.76
TTC3-217ENST00000481605 NACC1Q96RE7 527 aa26.06■■□□□ 1.76
TTC3-217ENST00000481605 CSRNP2Q9H175 543 aa26.06■■□□□ 1.76
TTC3-217ENST00000481605 DBR1Q9UK59 544 aaKnown RBP26.06■■□□□ 1.76
TTC3-217ENST00000481605 CTSAP10619 480 aa26.05■■□□□ 1.76
TTC3-217ENST00000481605 ARF4P18085 180 aaPredicted RBP26.05■■□□□ 1.76
TTC3-217ENST00000481605 CBX2Q14781 532 aaPredicted RBP26.05■■□□□ 1.76
TTC3-217ENST00000481605 POTEGQ6S5H5 508 aa26.05■■□□□ 1.76
TTC3-217ENST00000481605 TMEM87AQ8NBN3 555 aa26.05■■□□□ 1.76
TTC3-217ENST00000481605 RPGRIP1Q96KN7 1286 aa26.05■■□□□ 1.76
TTC3-217ENST00000481605 RNF39Q9H2S5 420 aa26.05■■□□□ 1.76
TTC3-217ENST00000481605 HES2Q9Y543 173 aa26.05■■□□□ 1.76
TTC3-217ENST00000481605 ALDH2P05091 517 aa26.04■■□□□ 1.76
TTC3-217ENST00000481605 RPA1P27694 616 aa26.04■■□□□ 1.76
TTC3-217ENST00000481605 TRAPPC10P48553 1259 aa26.04■■□□□ 1.76
TTC3-217ENST00000481605 MCPH1Q8NEM0 835 aa26.04■■□□□ 1.76
TTC3-217ENST00000481605 TMEM175Q9BSA9 504 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms