RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 SMG5Q9UPR3 1016 aaKnown RBP12.31□□□□□ -0.44
DDX39B-219ENST00000481456 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 HNRNPDLO14979 420 aaKnown RBP12.31□□□□□ -0.44
DDX39B-219ENST00000481456 PSMC4P43686 418 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 VAMP7P51809 220 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 ERP27Q96DN0 273 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
DDX39B-219ENST00000481456 RBM41Q96IZ5 413 aaKnown RBP12.31□□□□□ -0.44
DDX39B-219ENST00000481456 ATRNO75882 1429 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 UBXN2AP68543 259 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 KLHL38Q2WGJ6 581 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 GLG1Q92896 1179 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 REEP2Q9BRK0 252 aa12.31□□□□□ -0.44
DDX39B-219ENST00000481456 CREB3O43889 395 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 EYA4O95677 639 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 NLRX1Q86UT6 975 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 RFX6Q8HWS3 928 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 APLFQ8IW19 511 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 ATL2Q8NHH9 583 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 FECHP22830 423 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 ARFIP2P53365 341 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 ARL4CP56559 192 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 GRAPQ13588 217 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 PCGF5Q86SE9 256 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 NME8Q8N427 588 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 AIPL1Q9NZN9 384 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 DCTN4Q9UJW0 460 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 ALG6Q9Y672 507 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 BMP3P12645 472 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 PON1P27169 355 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 HOXA13P31271 388 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 COG7P83436 770 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 KRT81Q14533 505 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 SPDYCQ5MJ68 293 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 DEPTORQ8TB45 409 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 SLIT3O75094 1523 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 PRELPP51888 382 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 ZNF571Q7Z3V5 609 aaPredicted RBP12.3□□□□□ -0.44
DDX39B-219ENST00000481456 DNAJC9Q8WXX5 260 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 TRABDQ9H4I3 376 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 PCDHGC5Q9Y5F6 944 aa12.3□□□□□ -0.44
DDX39B-219ENST00000481456 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 MYBP10242 640 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 MYBL1P10243 752 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 COPB2P35606 906 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 BBS9Q3SYG4 887 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 BRDTQ58F21 947 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 DNAJC24Q6P3W2 148 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 SNX16P57768 344 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 BASP1P80723 227 aaKnown RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 RCSD1Q6JBY9 416 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 DYDC2Q96IM9 177 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 EIF2AK1Q9BQI3 630 aaKnown RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 MCF2LO15068 1137 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 SLC37A4O43826 429 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 KLRC4O43908 158 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 HNRNPH3P31942 346 aaKnown RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 CPXCR1Q8N123 301 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 TTC17Q96AE7 1141 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 NVLO15381 856 aaKnown RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 RNF8O76064 485 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 RASA1P20936 1047 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.29□□□□□ -0.441e-30■■□□□ 13.8
DDX39B-219ENST00000481456 TMEM154Q6P9G4 183 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 MCF2L2Q86YR7 1114 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 TATDN2Q93075 761 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 CYTH2Q99418 400 aa12.29□□□□□ -0.44
DDX39B-219ENST00000481456 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
DDX39B-219ENST00000481456 CFAP69A5D8W1 941 aa12.28□□□□□ -0.44
DDX39B-219ENST00000481456 UBOX5O94941 541 aa12.28□□□□□ -0.44
DDX39B-219ENST00000481456 RARGP13631 454 aa12.28□□□□□ -0.44
DDX39B-219ENST00000481456 COMTP21964 271 aa12.28□□□□□ -0.44
DDX39B-219ENST00000481456 SLC1A1P43005 524 aa12.28□□□□□ -0.44
DDX39B-219ENST00000481456 FNTAP49354 379 aa12.28□□□□□ -0.44
DDX39B-219ENST00000481456 AP2B1P63010 937 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms