RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 LINC01465Q8N7H1 131 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 LENG9Q96B70 501 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 KLHL5Q96PQ7 755 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 ADAMTS10Q9H324 1103 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 C6orf50Q9HD87 102 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 WDR6Q9NNW5 1121 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 MAN1C1Q9NR34 630 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 SLC2A4RGQ9NR83 387 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 GABBR1Q9UBS5 961 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 TCEAL9Q9UHQ7 104 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 AKT3Q9Y243 479 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 PCDHA10Q9Y5I2 948 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 NUMBLQ9Y6R0 609 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 CCDC196A0A1B0GTZ2 297 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 CCDC195A0A1B0GUA6 201 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 KANSL1LA0AUZ9 987 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 MAGEB2O15479 319 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 RFPL2O75678 378 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 CNPP09543 421 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 CD72P21854 359 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 CIITAP33076 1130 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 POLGP54098 1239 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 FGD1P98174 961 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 GIT2Q14161 759 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 GET4Q7L5D6 327 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 DDX53Q86TM3 631 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 CCDC12Q8WUD4 166 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 STAMQ92783 540 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 NELL1Q92832 810 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 PHKBQ93100 1093 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 IGSF21Q96ID5 467 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 ZNF668Q96K58 619 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 FAM167AQ96KS9 214 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 RPP25Q9BUL9 199 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 ZMIZ1Q9ULJ6 1067 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 CEP131Q9UPN4 1083 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 NID2Q14112 1375 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 PATJQ8NI35 1801 aa10.63□□□□□ -0.71
SMARCE1-210ENST00000481231 FAM170BA6NMN3 283 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 C1QTNF9BB2RNN3 333 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 ANHXE9PGG2 379 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 INPPL1O15357 1258 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 PRPF3O43395 683 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 EDIL3O43854 480 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 TBC1D4O60343 1298 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 CDC45O75419 566 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 OATP04181 439 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 PROS1P07225 676 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 C1QTNF9P0C862 333 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 DARSP14868 501 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 NCLP19338 710 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 EIF4BP23588 611 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 TMOD1P28289 359 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 GNA11P29992 359 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 GPC5P78333 572 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 SHC2P98077 582 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 PRKCEQ02156 737 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 UGCGQ16739 394 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 LONRF3Q496Y0 759 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 EFCAB12Q6NXP0 572 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 BRF1Q92994 677 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 NXPE3Q969Y0 559 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 BORCS6Q96GS4 357 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 SHDQ96IW2 340 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 EMILIN2Q9BXX0 1053 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 MRPL9Q9BYD2 267 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 DISC1Q9NRI5 854 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 SAMM50Q9Y512 469 aa10.62□□□□□ -0.71
SMARCE1-210ENST00000481231 C2CD2LO14523 706 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 MSH4O15457 936 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 CHMP2AO43633 222 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 B4GALT3O60512 393 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 LAMP2P13473 410 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 ZSCAN20P17040 1043 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 FGFR4P22455 802 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 GPC3P51654 580 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 MLF2Q15773 248 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 PRR23CQ6ZRP0 262 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 PRR23BQ6ZRT6 265 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 Q6ZUG5 572 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 ZNF598Q86UK7 904 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 CMASQ8NFW8 434 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 BICD2Q8TD16 824 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 SMG7Q92540 1137 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 KCNB2Q92953 911 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 GJA10Q969M2 543 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 ZNF707Q96C28 371 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 JAKMIP1Q96N16 626 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 SCLT1Q96NL6 688 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 DDX23Q9BUQ8 820 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 GBP3Q9H0R5 595 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 SEMA4GQ9NTN9 838 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 DNAJB4Q9UDY4 337 aa10.61□□□□□ -0.71
SMARCE1-210ENST00000481231 EVPLQ92817 2033 aa10.6□□□□□ -0.71
SMARCE1-210ENST00000481231 A0A0U1RQF3 1178 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms