RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MBTPS2O43462 519 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 GPR37L1O60883 481 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 TBX10O75333 385 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 FGFR4P22455 802 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 DNAJB1P25685 340 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 ARL2P36404 184 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 PRPHP41219 470 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 TECP42680 631 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 ZP2Q05996 745 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 SLC27A1Q6PCB7 646 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 MRPL10Q7Z7H8 261 aaKnown RBP12.7□□□□□ -0.38
CCM2-213ENST00000480658 DDX53Q86TM3 631 aaKnown RBP12.7□□□□□ -0.38
CCM2-213ENST00000480658 KSR1Q8IVT5 923 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 KIFAP3Q92845 792 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
CCM2-213ENST00000480658 NECTIN4Q96NY8 510 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 NECAB3Q96P71 396 aaPredicted RBP12.7□□□□□ -0.38
CCM2-213ENST00000480658 RNF19AQ9NV58 838 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 TBC1D13Q9NVG8 400 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
CCM2-213ENST00000480658 H3BQV1 296 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 DCXO43602 365 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 USO1O60763 962 aaKnown RBP12.69□□□□□ -0.38
CCM2-213ENST00000480658 CSDE1O75534 798 aaKnown RBP12.69□□□□□ -0.38
CCM2-213ENST00000480658 OFD1O75665 1012 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 ALDH2P05091 517 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 ITGA4P13612 1032 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 IRS1P35568 1242 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 EFNA5P52803 228 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 FOSBP53539 338 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 CREMQ03060 361 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 ITIH3Q06033 890 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 PLPP4Q5VZY2 271 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 CDCA2Q69YH5 1023 aaPredicted RBP12.69□□□□□ -0.38
CCM2-213ENST00000480658 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 RBM23Q86U06 439 aaKnown RBP12.69□□□□□ -0.38
CCM2-213ENST00000480658 CATSPER3Q86XQ3 398 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 MRPL43Q8N983 215 aaKnown RBP12.69□□□□□ -0.38
CCM2-213ENST00000480658 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 TIPINQ9BVW5 301 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 CSRNP2Q9H175 543 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 POLR3FQ9H1D9 316 aaPredicted RBP12.69□□□□□ -0.38
CCM2-213ENST00000480658 LRWD1Q9UFC0 647 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 INPP5FQ9Y2H2 1132 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
CCM2-213ENST00000480658 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 PRR33A8MZF0 331 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 SLC26A4O43511 780 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 TSPAN1O60635 241 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 CSPG5O95196 566 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 BMP15O95972 392 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 C1RP00736 705 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 CTSAP10619 480 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 SCP2P22307 547 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 NAMPTP43490 491 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 ERVFC1P60507 584 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 MBTD1Q05BQ5 628 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 CAPSQ13938 189 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 MAPK6Q16659 721 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 FAM187BQ17R55 369 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 PIGOQ8TEQ8 1089 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 IGSF21Q96ID5 467 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 KIF2CQ99661 725 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 C17orf75Q9HAS0 396 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 XPNPEP1Q9NQW7 623 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
CCM2-213ENST00000480658 NR2E1Q9Y466 385 aa12.68□□□□□ -0.38
CCM2-213ENST00000480658 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 A0A1B0GUA9 196 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 C2orf71A6NGG8 1288 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 N4BP3O15049 544 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 CYP11B2P19099 503 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 GLRA2P23416 452 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 HOXA11P31270 313 aaPredicted RBP12.67□□□□□ -0.38
CCM2-213ENST00000480658 CA8P35219 290 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
CCM2-213ENST00000480658 ZNF174Q15697 407 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 ARL6IP4Q66PJ3 421 aaKnown RBP12.67□□□□□ -0.38
CCM2-213ENST00000480658 DTHD1Q6ZMT9 781 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 ADGRD2Q7Z7M1 963 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 GPR65Q8IYL9 337 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 VPS52Q8N1B4 723 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 IGSF22Q8N9C0 903 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
CCM2-213ENST00000480658 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 DRC1Q96MC2 740 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
CCM2-213ENST00000480658 PHF7Q9BWX1 381 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms