RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 MSRAQ9UJ68 235 aa16.69■□□□□ 0.26
ABCF3-213ENST00000480539 LRFN2Q9ULH4 789 aa16.69■□□□□ 0.26
ABCF3-213ENST00000480539 PCDHA11Q9Y5I1 949 aa16.69■□□□□ 0.26
ABCF3-213ENST00000480539 MYH11P35749 1972 aa16.69■□□□□ 0.26
ABCF3-213ENST00000480539 ARHGEF15O94989 841 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 CA3P07451 260 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 IDEP14735 1019 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 SYKP43405 635 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 AFMP43652 599 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 GATMP50440 423 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 EFNA5P52803 228 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 NCKAP1LP55160 1127 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 PCBP1Q15365 356 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCF3-213ENST00000480539 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 SPIRE2Q8WWL2 714 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 TIFAQ96CG3 184 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 PYM1Q9BRP8 204 aaKnown RBP16.68■□□□□ 0.26
ABCF3-213ENST00000480539 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
ABCF3-213ENST00000480539 TRIM9Q9C026 710 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 FZD8Q9H461 694 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 KBTBD4Q9NVX7 518 aa16.68■□□□□ 0.26
ABCF3-213ENST00000480539 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 FGFR1P11362 822 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 ATF7P17544 494 aaPredicted RBP16.67■□□□□ 0.26
ABCF3-213ENST00000480539 AXLP30530 894 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 SMTNP53814 917 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 ASIC1P78348 528 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
ABCF3-213ENST00000480539 PRPF4BQ13523 1007 aaKnown RBP16.67■□□□□ 0.26
ABCF3-213ENST00000480539 FAM187BQ17R55 369 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 LONRF3Q496Y0 759 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
ABCF3-213ENST00000480539 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 ECHDC2Q86YB7 292 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 RAD9AQ99638 391 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 BLZF1Q9H2G9 400 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 PDZD7Q9H5P4 517 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 FAM105AQ9NUU6 356 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 PCDHB7Q9Y5E2 793 aa16.67■□□□□ 0.26
ABCF3-213ENST00000480539 K7ERI5 159 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 ACKR2O00590 384 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 TRAK2O60296 914 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 NPTXRO95502 500 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 SLFN14P0C7P3 912 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 MAPTP10636 758 aaKnown RBP16.66■□□□□ 0.26
ABCF3-213ENST00000480539 NMT1P30419 496 aaKnown RBP16.66■□□□□ 0.26
ABCF3-213ENST00000480539 RAB27AP51159 221 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 TTC3P53804 2025 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 HTRA4P83105 476 aaPredicted RBP16.66■□□□□ 0.26
ABCF3-213ENST00000480539 AMPD3Q01432 767 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 NT5DC1Q5TFE4 455 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 PPP2R2DQ66LE6 453 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 FAM43BQ6ZT52 329 aaPredicted RBP16.66■□□□□ 0.26
ABCF3-213ENST00000480539 SPRED2Q7Z698 418 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 FAM178BQ8IXR5 827 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 CRIPAKQ8N1N5 446 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 LPPQ93052 612 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 CCDC51Q96ER9 411 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 FIZ1Q96SL8 496 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 LRRC27Q9C0I9 530 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 RC3H2Q9HBD1 1191 aaKnown RBP16.66■□□□□ 0.26
ABCF3-213ENST00000480539 PANK4Q9NVE7 773 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 TMEM161AQ9NX61 479 aa16.66■□□□□ 0.26
ABCF3-213ENST00000480539 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 MEIS3P2A8K0S8 358 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 N4BP3O15049 544 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-213ENST00000480539 GAP43P17677 238 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 COASYQ13057 564 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 CUL4BQ13620 913 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 ATF7IP2Q5U623 682 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 EEF1DP3Q658K8 133 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 SLC27A1Q6PCB7 646 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 HAUS6Q7Z4H7 955 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 ZNF598Q86UK7 904 aaKnown RBP16.65■□□□□ 0.26
ABCF3-213ENST00000480539 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 NTPCRQ9BSD7 190 aaKnown RBP16.65■□□□□ 0.26
ABCF3-213ENST00000480539 TRIM6Q9C030 488 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-213ENST00000480539 NXF3Q9H4D5 531 aaKnown RBP16.65■□□□□ 0.26
ABCF3-213ENST00000480539 TMEM134Q9H6X4 195 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 ELAC1Q9H777 363 aaKnown RBP16.65■□□□□ 0.26
ABCF3-213ENST00000480539 RNF19AQ9NV58 838 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 USP25Q9UHP3 1055 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 INSL6Q9Y581 213 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
ABCF3-213ENST00000480539 TBKBP1A7MCY6 615 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 H0YCG3 227 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 DGKIO75912 1065 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 ZNF202O95125 648 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 FAM189BP81408 668 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 STRN3Q13033 797 aa16.64■□□□□ 0.25
ABCF3-213ENST00000480539 ZC2HC1CQ53FD0 456 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-213ENST00000480539 HERC4Q5GLZ8 1057 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms