RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 LONRF3Q496Y0 759 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 UBXN11Q5T124 520 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 ZNF598Q86UK7 904 aaKnown RBP13.32□□□□□ -0.28
CCM2-212ENST00000480382 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
CCM2-212ENST00000480382 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
CCM2-212ENST00000480382 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 ARNTL2Q8WYA1 636 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 LPPQ93052 612 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
CCM2-212ENST00000480382 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
CCM2-212ENST00000480382 C17orf80Q9BSJ5 609 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 TRAIPQ9BWF2 469 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 FZD8Q9H461 694 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 KMT5AQ9NQR1 393 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 RNF19AQ9NV58 838 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
CCM2-212ENST00000480382 ARHGAP28Q9P2N2 729 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 ODF2LQ9ULJ1 636 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 ATG2AQ2TAZ0 1938 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
CCM2-212ENST00000480382 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 SLC16A4O15374 487 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 LINC00271P0C7V0 271 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 PLS3P13797 630 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 RAB27AP51159 221 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
CCM2-212ENST00000480382 GIT2Q14161 759 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 MAPK6Q16659 721 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 FAM187BQ17R55 369 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 RESP18Q5W5W9 173 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 FIBCD1Q8N539 461 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 DHX58Q96C10 678 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 CCDC51Q96ER9 411 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
CCM2-212ENST00000480382 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 GDPD2Q9HCC8 539 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 HCSTQ9UBK5 93 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 PCDHB2Q9Y5E7 798 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 MRPL42Q9Y6G3 142 aaKnown RBP13.31□□□□□ -0.28
CCM2-212ENST00000480382 PLXNA4Q9HCM2 1894 aa13.31□□□□□ -0.28
CCM2-212ENST00000480382 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 MYMKA6NI61 221 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 RFXAPO00287 272 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 HOXA2O43364 376 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 TBCAO75347 108 aaKnown RBP13.3□□□□□ -0.28
CCM2-212ENST00000480382 FAM13AO94988 1023 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 EOMESO95936 686 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 SKIP12755 728 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 CTNNB1P35222 781 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 EFNA5P52803 228 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 ERVK-21P61565 698 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 PRPF4BQ13523 1007 aaKnown RBP13.3□□□□□ -0.28
CCM2-212ENST00000480382 E2F4Q16254 413 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 CLLU1OSQ5K130 101 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 SLC27A1Q6PCB7 646 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 SV2BQ7L1I2 683 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 DYMQ7RTS9 669 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 ABI1Q8IZP0 508 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 DDX12PQ92771 950 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 CASD1Q96PB1 797 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 SCAND2PQ9GZW5 306 aaPredicted RBP13.3□□□□□ -0.28
CCM2-212ENST00000480382 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 PDZD7Q9H5P4 517 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 FAM13BQ9NYF5 915 aa13.3□□□□□ -0.28
CCM2-212ENST00000480382 LARSQ9P2J5 1176 aaKnown RBP13.3□□□□□ -0.28
CCM2-212ENST00000480382 TDRD15B5MCY1 1934 aaKnown RBP13.3□□□□□ -0.28
CCM2-212ENST00000480382 K7ENM7 598 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 K7ERI5 159 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 ACKR2O00590 384 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 POLR2DO15514 142 aaKnown RBP13.29□□□□□ -0.28
CCM2-212ENST00000480382 NPTXRO95502 500 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 FOSL2P15408 326 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 ZNF131P52739 623 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 SMG8Q8ND04 991 aaKnown RBP13.29□□□□□ -0.28
CCM2-212ENST00000480382 TMEM161BQ8NDZ6 487 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 STAMQ92783 540 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 CLP1Q92989 425 aaKnown RBP13.29□□□□□ -0.28
CCM2-212ENST00000480382 GAS2L1Q99501 681 aaPredicted RBP13.29□□□□□ -0.28
CCM2-212ENST00000480382 TRIM6Q9C030 488 aaPredicted RBP13.29□□□□□ -0.28
CCM2-212ENST00000480382 TMEM117Q9H0C3 514 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 NXF3Q9H4D5 531 aaKnown RBP13.29□□□□□ -0.28
CCM2-212ENST00000480382 TMEM134Q9H6X4 195 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 HES2Q9Y543 173 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 IPPQ9Y573 584 aa13.29□□□□□ -0.28
CCM2-212ENST00000480382 A0A1B0GUA9 196 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms