RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 OTUD6AQ7L8S5 288 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 OTOP3Q7RTS5 596 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 CABP7Q86V35 215 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 SIX5Q8N196 739 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 URGCPQ8TCY9 931 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 LPPQ93052 612 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 ACSF2Q96CM8 615 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 CEP170P1Q96L14 293 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 RTP3Q9BQQ7 232 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 SH2D3AQ9BRG2 576 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 TM6SF1Q9BZW5 370 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 SFXN1Q9H9B4 322 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 BMP2KQ9NSY1 1161 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 PPP4R2Q9NY27 417 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 DCHS1Q96JQ0 3298 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 KRBA1A5PL33 1030 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 EPB41L2O43491 1005 aaKnown RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 B4GALT3O60512 393 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 LILRB3O75022 631 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 N4BP1O75113 896 aaKnown RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 OFD1O75665 1012 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 LMNAP02545 664 aaKnown RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 ATP2B1P20020 1258 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 PHKA2P46019 1235 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 QARSP47897 775 aaKnown RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 CLCN4P51793 760 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 DRP2Q13474 957 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 TOB2Q14106 344 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 NTRK3Q16288 839 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 UGCGQ16739 394 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 Q4G0T1 1027 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 XKR9Q5GH70 373 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 PPFIBP1Q86W92 1011 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 TPH2Q8IWU9 490 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 HACE1Q8IYU2 909 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 FAM177A1Q8N128 213 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 FBXL16Q8N461 479 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 TCP11Q8WWU5 503 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 PSPC1Q8WXF1 523 aaKnown RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 SLC5A5Q92911 643 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 KCNB2Q92953 911 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 PGBD4Q96DM1 585 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 FAM20AQ96MK3 541 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 AIFM3Q96NN9 605 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 KLHL5Q96PQ7 755 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 TRAIPQ9BWF2 469 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 TRIM6Q9C030 488 aaPredicted RBP7.91□□□□□ -1.14
COL17A1-205ENST00000480127 SEMA4AQ9H3S1 761 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 CHST12Q9NRB3 414 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 TBC1D13Q9NVG8 400 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 IGSF9Q9P2J2 1179 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 WNT16Q9UBV4 365 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 DNAJB4Q9UDY4 337 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 FBXL21Q9UKT6 434 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 NID2Q14112 1375 aa7.91□□□□□ -1.14
COL17A1-205ENST00000480127 A0A087WZ62 844 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CARNS1A5YM72 827 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 TMEM150BA6NC51 233 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 EDIL3O43854 480 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF623O75123 536 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 NR1I2O75469 434 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 P4HBP07237 508 aaKnown RBP7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CFHP08603 1231 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CNPP09543 421 aaKnown RBP7.9□□□□□ -1.14
COL17A1-205ENST00000480127 KLRC2P26717 231 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 SLC11A1P49279 550 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 RAB27AP51159 221 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 NEK4P51957 841 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CYP4A11Q02928 519 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 TFDP1Q14186 410 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 TARBP2Q15633 366 aaKnown RBP7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CALCRLQ16602 461 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 NOMO2Q5JPE7 1267 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 PLA2G4FQ68DD2 849 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 ELMSAN1Q6PJG2 1045 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 C15orf39Q6ZRI6 1047 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 DGLUCYQ7Z3D6 616 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF410Q86VK4 478 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF280BQ86YH2 543 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 SLFN12Q8IYM2 578 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 KIAA2013Q8IYS2 634 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 FAM184AQ8NB25 1140 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 DAGLBQ8NCG7 672 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CMASQ8NFW8 434 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-205ENST00000480127 KCNG4Q8TDN1 519 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 RSAD2Q8WXG1 361 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 RSPH1Q8WYR4 309 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 LENG9Q96B70 501 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 CEP89Q96ST8 783 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 FDXACB1Q9BRP7 624 aaPredicted RBP7.9□□□□□ -1.14
COL17A1-205ENST00000480127 LXNQ9BS40 222 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 FAM105AQ9NUU6 356 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 COL4A3BPQ9Y5P4 624 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 R4GN57 208 aa7.9□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF292O60281 2723 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 IGKV6-21A0A0C4DH24 114 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 INO80B-WBP1J3KQ70 363 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 SLC37A4O43826 429 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 PSMD10O75832 226 aa7.89□□□□□ -1.15
COL17A1-205ENST00000480127 DDHD2O94830 711 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms