RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HDAC7Q8WUI4 952 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 LPPQ93052 612 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 DOCK6Q96HP0 2047 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 CDHR1Q96JP9 859 aa13.6□□□□□ -0.23
USP11-208ENST00000480104 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
USP11-208ENST00000480104 SPAG17Q6Q759 2223 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 MAN2B1O00754 1011 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 SOD2P04179 222 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 ITGB5P18084 799 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 STAT5BP51692 787 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 ALX1Q15699 326 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 GLB1LQ6UWU2 654 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 TAS1R1Q7RTX1 841 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 PLPPR4Q7Z2D5 763 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 KBTBD6Q86V97 674 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 MIER1Q8N108 512 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 SPEM1Q8N4L4 309 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 LRIG1Q96JA1 1093 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 VPS45Q9NRW7 570 aa13.59□□□□□ -0.23
USP11-208ENST00000480104 TEP1Q99973 2627 aaKnown RBP13.59□□□□□ -0.23
USP11-208ENST00000480104 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.23
USP11-208ENST00000480104 ZBTB42B2RXF5 422 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 TGM5O43548 720 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 GAS2O43903 313 aaKnown RBP13.58□□□□□ -0.24
USP11-208ENST00000480104 C1QL1O75973 258 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 PAPSS2O95340 614 aaPredicted RBP13.58□□□□□ -0.24
USP11-208ENST00000480104 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
USP11-208ENST00000480104 SLC35G1Q2M3R5 365 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 WDR5BQ86VZ2 330 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
USP11-208ENST00000480104 RSPH1Q8WYR4 309 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 MKNK1Q9BUB5 465 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 PLA2G2FQ9BZM2 168 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 PCDHGA5Q9Y5G8 931 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 COL12A1Q99715 3063 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 NEDD4P46934 1319 aa13.58□□□□□ -0.24
USP11-208ENST00000480104 MEIS3P2A8K0S8 358 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 KLRF2D3W0D1 207 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 ZMYND10O75800 440 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 C22orf31O95567 290 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 FGAP02671 866 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 FGFR4P22455 802 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 GLUD2P49448 558 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 ACTR2P61160 394 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 MTMR1Q13613 665 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 MFSD6Q6ZSS7 791 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 CACNA2D4Q7Z3S7 1137 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 FAM3CQ92520 227 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 DNASE1L2Q92874 299 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 GPATCH3Q96I76 525 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 ZNF668Q96K58 619 aaPredicted RBP13.57□□□□□ -0.24
USP11-208ENST00000480104 SLC9A2Q9UBY0 812 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 SSX2IPQ9Y2D8 614 aa13.57□□□□□ -0.24
USP11-208ENST00000480104 HBP1O60381 514 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 ECI2O75521 394 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 CHRNB1P11230 501 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 EIF4BP23588 611 aaKnown RBP13.56□□□□□ -0.24
USP11-208ENST00000480104 PHKA2P46019 1235 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 CLCN3P51790 818 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 NLRP11P59045 1033 aaKnown RBP13.56□□□□□ -0.24
USP11-208ENST00000480104 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 METTL13Q8N6R0 699 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 ENAHQ8N8S7 591 aaPredicted RBP13.56□□□□□ -0.24
USP11-208ENST00000480104 GAB3Q8WWW8 586 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 ESR2Q92731 530 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 PIGSQ96S52 555 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 DACT1Q9NYF0 836 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 COL1A2P08123 1366 aa13.56□□□□□ -0.24
USP11-208ENST00000480104 MYO9AB2RTY4 2548 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 OFD1O75665 1012 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 RPP40O75818 363 aaKnown RBP13.55□□□□□ -0.24
USP11-208ENST00000480104 DDHD2O94830 711 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 FGD1P98174 961 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 TRAF1Q13077 416 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 Q6ZS52 159 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 MARCH5Q9NX47 278 aa13.55□□□□□ -0.24
USP11-208ENST00000480104 PRG3Q9Y2Y8 225 aaPredicted RBP13.55□□□□□ -0.24
USP11-208ENST00000480104 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 NRP1O14786 923 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 PCP11498 1178 aaKnown RBP13.54□□□□□ -0.24
USP11-208ENST00000480104 HOXA6P31267 233 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 SLC26A2P50443 739 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 SCAPQ12770 1279 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 PTGDRQ13258 359 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 GRM2Q14416 872 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 SMARCC2Q8TAQ2 1214 aa13.54□□□□□ -0.24
USP11-208ENST00000480104 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms