RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SEPT8Q92599 483 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 MAN1B1Q9UKM7 699 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 LETM1O95202 739 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-205ENST00000480067 KIF20AO95235 890 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 PPIGQ13427 754 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLDN11-205ENST00000480067 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-205ENST00000480067 SYCP3Q8IZU3 236 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 GLIS3Q8NEA6 775 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 KCNN1Q92952 543 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 BICD1Q96G01 975 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 ACCSQ96QU6 501 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 STRA6Q9BX79 667 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 MRPL4Q9BYD3 311 aaKnown RBP12.3□□□□□ -0.44
CLDN11-205ENST00000480067 FGFBP2Q9BYJ0 223 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 TMEM206Q9H813 350 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 EXOC7Q9UPT5 735 aa12.3□□□□□ -0.44
CLDN11-205ENST00000480067 TNRC18O15417 2968 aaPredicted RBP12.3□□□□□ -0.44
CLDN11-205ENST00000480067 LAMA2P24043 3122 aaKnown RBP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 EIF3DO15371 548 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 B4GALT5O43286 388 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 TSPAN1O60635 241 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 PPP1R37O75864 691 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 PRPF6O94906 941 aaKnown RBP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 CXCL10P02778 98 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 PFKMP08237 780 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 ZSCAN20P17040 1043 aaPredicted RBP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 AXLP30530 894 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 FPGSQ05932 587 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 MORC3Q14149 939 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 AMHR2Q16671 573 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 L1TD1Q5T7N2 865 aaKnown RBP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 EPM2AIP1Q7L775 607 aaPredicted RBP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 MYOCDQ8IZQ8 938 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 KIAA0895Q8NCT3 520 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 DBF4BQ8NFT6 615 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 ZNF507Q8TCN5 953 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 SCFD1Q8WVM8 642 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 APBB2Q92870 758 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 ERVK-5Q9HDB9 667 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 CHST12Q9NRB3 414 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
CLDN11-205ENST00000480067 USP20Q9Y2K6 914 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
CLDN11-205ENST00000480067 HNRNPDLO14979 420 aaKnown RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 ARF4P18085 180 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 HOXA11P31270 313 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 LIG4P49917 911 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 KCNA1Q09470 495 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 STIM1Q13586 685 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 IKBKEQ14164 716 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 KNOP1Q1ED39 458 aaKnown RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 NOTUMQ6P988 496 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 ZPBP2Q6X784 338 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 RBM43Q6ZSC3 357 aaKnown RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 FAM43BQ6ZT52 329 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 MAP4K3Q8IVH8 894 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 NELFCDQ8IXH7 590 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 SMYD4Q8IYR2 804 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 CPB2Q96IY4 423 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 TCHPQ9BT92 498 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 TARS2Q9BW92 718 aaKnown RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 FTHL17Q9BXU8 183 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 IL23AQ9NPF7 189 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 AGPAT5Q9NUQ2 364 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 RANBP2P49792 3224 aaKnown RBP12.28□□□□□ -0.44
CLDN11-205ENST00000480067 CNTNAP2Q9UHC6 1331 aa12.28□□□□□ -0.44
CLDN11-205ENST00000480067 A0A1B0GUA9 196 aa12.27□□□□□ -0.44
CLDN11-205ENST00000480067 ACRP10323 421 aa12.27□□□□□ -0.44
CLDN11-205ENST00000480067 BMP6P22004 513 aa12.27□□□□□ -0.44
CLDN11-205ENST00000480067 PRCPP42785 496 aa12.27□□□□□ -0.44
CLDN11-205ENST00000480067 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.44
CLDN11-205ENST00000480067 TWF2Q6IBS0 349 aaKnown RBP12.27□□□□□ -0.44
CLDN11-205ENST00000480067 CNKSR3Q6P9H4 555 aa12.27□□□□□ -0.44
CLDN11-205ENST00000480067 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.44
CLDN11-205ENST00000480067 ACO2Q99798 780 aaKnown RBP12.27□□□□□ -0.44
CLDN11-205ENST00000480067 UBE4BO95155 1302 aa12.27□□□□□ -0.45
CLDN11-205ENST00000480067 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 RBAK-RBAKDNI3L0D1 243 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 N4BP3O15049 544 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 CLDN3O15551 220 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 TOM1L1O75674 476 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 FGBP02675 491 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 ACTN1P12814 892 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 PPP1R2P41236 205 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 MATR3P43243 847 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLDN11-205ENST00000480067 MLLT1Q03111 559 aaPredicted RBP12.26□□□□□ -0.45
CLDN11-205ENST00000480067 BMT2Q1RMZ1 405 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 HS2ST1Q7LGA3 356 aa12.26□□□□□ -0.45
CLDN11-205ENST00000480067 APBB1IPQ7Z5R6 666 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms