RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TTC17Q96AE7 1141 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRC1Q9BTT6 524 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 C17orf75Q9HAS0 396 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 LY9Q9HBG7 655 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SORCS3Q9UPU3 1222 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 KDM5AP29375 1690 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 LOC102724428A0A0B4J2F2 783 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 TMEM247A6NEH6 219 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 PIK3R2O00459 728 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 KCNQ3O43525 872 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 DIAPH2O60879 1101 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ADRA2BP18089 450 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 HNRNPH1P31943 449 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 EIF6P56537 245 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SIK1P57059 783 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SP4Q02446 784 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 DPYDQ12882 1025 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 STX5Q13190 355 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 DRAP1Q14919 205 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 TRMT5Q32P41 509 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RAD9BQ6WBX8 426 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RAPH1Q70E73 1250 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 MIGA2Q7L4E1 593 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ADAT2Q7Z6V5 191 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 LCORLQ8N3X6 602 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RMDN2Q96LZ7 410 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ACAP3Q96P50 834 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SIKE1Q9BRV8 207 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 PUS3Q9BZE2 481 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRN2O75325 713 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 TRPA1O75762 1119 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 MYL4P12829 197 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 PLS3P13797 630 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 CDC42EP1Q00587 391 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 COASYQ13057 564 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRC41Q15345 812 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 IZUMO3Q5VZ72 239 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 CYB5D1Q6P9G0 228 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 MAML1Q92585 1016 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 FAR2Q96K12 515 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 AP1M1Q9BXS5 423 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 NACA2Q9H009 215 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 KDM4CQ9H3R0 1056 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 BTG4Q9NY30 223 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 SLC24A2Q9UI40 661 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 LRCH1Q9Y2L9 728 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 PTPN22Q9Y2R2 807 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 NUB1Q9Y5A7 615 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 PCDHB2Q9Y5E7 798 aa6.52□□□□□ -1.36
PRPF4B-205ENST00000480058 PTPRUQ92729 1446 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 MYO3BQ8WXR4 1341 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TESPA1A2RU30 521 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SLCO1B7G3V0H7 640 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 KRT14P02533 472 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ATP1A1P05023 1023 aaKnown RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 PLA2G4AP47712 749 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 FXR1P51114 621 aaKnown RBP eCLIP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 HIF1AQ16665 826 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 MIS18BP1Q6P0N0 1132 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 NFRKBQ6P4R8 1299 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 GRAMD1CQ8IYS0 662 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 KCTD6Q8NC69 237 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 CEP70Q8NHQ1 597 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 FAM192AQ9GZU8 254 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 GOLPH3LQ9H4A5 285 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 EPS8L2Q9H6S3 715 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC38A10Q9HBR0 1119 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TRAF3IP3Q9Y228 551 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 FHOD1Q9Y613 1164 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ZC3H11AO75152 810 aaKnown RBP eCLIP6.52□□□□□ -1.377e-12■■■■■ 41
PRPF4B-205ENST00000480058 SNRPAP09012 282 aaKnown RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 KCNA4P22459 653 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 KCTD2Q14681 263 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 WASHC2DQ5SRD0 308 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TTBK2Q6IQ55 1244 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 JAMLQ86YT9 394 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 DAGLBQ8NCG7 672 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 RBM15Q96T37 977 aaKnown RBP eCLIP6.52□□□□□ -1.377e-10■■□□□ 11.7
PRPF4B-205ENST00000480058 TMEM47Q9BQJ4 181 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 PKD2L1Q9P0L9 805 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 L3MBTL1Q9Y468 752 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 USP27XA6NNY8 438 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 MAFGO15525 162 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ADORA1P30542 326 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ACTN3Q08043 901 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 NAA30Q147X3 362 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SYDE2Q5VT97 1194 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 NIM1KQ8IY84 436 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 RDM1Q8NG50 284 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 ORAI2Q96SN7 254 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TRPV6Q9H1D0 765 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 GRID1Q9ULK0 1009 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 H0Y3Z8 333 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 FTLP02792 175 aaPredicted RBP6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 GRK2P25098 689 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 TYK2P29597 1187 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC7A5Q01650 507 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 BOLA3Q53S33 107 aa6.52□□□□□ -1.37
PRPF4B-205ENST00000480058 FAM47CQ5HY64 1035 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms