RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.83□□□□□ -1.32
UPF3A-205ENST00000479712 CCDC194A0A1B0GVG4 234 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 TRIM75PA6NK02 468 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 ACOT7O00154 380 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 EXOC5O00471 708 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
UPF3A-205ENST00000479712 MPOP05164 745 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 MMEP08473 750 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 SDHBP21912 280 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 HERVK_113P62684 666 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 NR1I3Q14994 352 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 CLUL1Q15846 466 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 PAN2Q504Q3 1202 aaKnown RBP6.83□□□□□ -1.32
UPF3A-205ENST00000479712 NXNQ6DKJ4 435 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 C14orf80Q86SX3 495 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 CCDC146Q8IYE0 955 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 TCEAL8Q8IYN2 117 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 C7orf31Q8N865 590 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 HIPK4Q8NE63 616 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 ASB15Q8WXK1 588 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 ZNF496Q96IT1 587 aaPredicted RBP6.83□□□□□ -1.32
UPF3A-205ENST00000479712 CCM2LQ9NUG4 571 aaPredicted RBP6.83□□□□□ -1.32
UPF3A-205ENST00000479712 YBX2Q9Y2T7 364 aaKnown RBP6.83□□□□□ -1.32
UPF3A-205ENST00000479712 ITSN1Q15811 1721 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 UNC80Q8N2C7 3258 aa6.83□□□□□ -1.32
UPF3A-205ENST00000479712 ADAMTS4O75173 837 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 FAHP16930 419 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 SLC9A5Q14940 896 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 RAB3GAP1Q15042 981 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 MLC1Q15049 377 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 TMEM240Q5SV17 173 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 ADGRF1Q5T601 910 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 RPTNQ6XPR3 784 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 TTLL7Q6ZT98 887 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 AMIGO3Q86WK7 504 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 CXorf67Q86X51 503 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-205ENST00000479712 PHYKPLQ8IUZ5 450 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 CPA6Q8N4T0 437 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 TGFBRAP1Q8WUH2 860 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 TSPAN17Q96FV3 270 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 GBP4Q96PP9 640 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 PCGF6Q9BYE7 350 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 GOLGA2P5Q9HBQ8 144 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 TCF7L1Q9HCS4 588 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 KCNG1Q9UIX4 513 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 CCNL1Q9UK58 526 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-205ENST00000479712 ANKRD6Q9Y2G4 727 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 KIF13BQ9NQT8 1826 aa6.82□□□□□ -1.32
UPF3A-205ENST00000479712 UBA6A0AVT1 1052 aaPredicted RBP6.81□□□□□ -1.32
UPF3A-205ENST00000479712 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 GOLGA6CA6NDK9 693 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 GOLGA6BA6NDN3 693 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA12O60330 932 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 GOLGA6DP0CG33 693 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PF4V1P10720 104 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 AFMP43652 599 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PRR5P85299 388 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 ODF1Q14990 250 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 ACAP2Q15057 778 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 ESPNLQ6ZVH7 1005 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 MAGEB6Q8N7X4 407 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 TTC8Q8TAM2 541 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 E2F7Q96AV8 911 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 INTS4Q96HW7 963 aaKnown RBP6.81□□□□□ -1.32
UPF3A-205ENST00000479712 SEMA4AQ9H3S1 761 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 GOLGA6AQ9NYA3 693 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 DTLQ9NZJ0 730 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 INVSQ9Y283 1065 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 GIT1Q9Y2X7 761 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 ASB1Q9Y576 335 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA9Q9Y5G4 932 aaKnown RBP6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA8Q9Y5G5 932 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA7Q9Y5G6 932 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA6Q9Y5G7 932 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA3Q9Y5H0 932 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 PCDHGA2Q9Y5H1 932 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 HCFC2Q9Y5Z7 792 aa6.81□□□□□ -1.32
UPF3A-205ENST00000479712 MKI67P46013 3256 aaKnown RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 PRPF3O43395 683 aaKnown RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 LY75O60449 1722 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 ENPP1P22413 925 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 AOAHP28039 575 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 GNALP38405 381 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 ECE1P42892 770 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 MAPKAPK2P49137 400 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 TGFB2P61812 414 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 DBPQ10586 325 aaPredicted RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 TCIRG1Q13488 830 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 FSCN1Q16658 493 aaKnown RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 TTC38Q5R3I4 469 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 CXorf57Q6NSI4 855 aaKnown RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 RTN4RL1Q86UN2 441 aaPredicted RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 CILP2Q8IUL8 1156 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 TPH2Q8IWU9 490 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 FLAD1Q8NFF5 587 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 FERMT2Q96AC1 680 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 FOXRED1Q96CU9 486 aaPredicted RBP6.8□□□□□ -1.32
UPF3A-205ENST00000479712 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
UPF3A-205ENST00000479712 ANO3Q9BYT9 981 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms