RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 EPHA7Q15375 998 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 DLGAP5Q15398 846 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 SPDYE1Q8NFV5 336 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-210ENST00000478979 FAM129AQ9BZQ8 928 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 TRIM31Q9BZY9 425 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 NUCKS1Q9H1E3 243 aaKnown RBP15.23■□□□□ 0.03
CCDC78-210ENST00000478979 UNC45AQ9H3U1 944 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 OSGEPQ9NPF4 335 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 TRAF3IP3Q9Y228 551 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 PDXKO00764 312 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 COPB2P35606 906 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 LLGL1Q15334 1064 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 CBWD6Q4V339 395 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 CBWD3Q5JTY5 395 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 CBWD5Q5RIA9 395 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 FRMD5Q7Z6J6 570 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 EIF1ADQ8N9N8 165 aaKnown RBP15.23■□□□□ 0.03
CCDC78-210ENST00000478979 LXNQ9BS40 222 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 DDX47Q9H0S4 455 aaKnown RBP15.23■□□□□ 0.03
CCDC78-210ENST00000478979 AIPL1Q9NZN9 384 aa15.23■□□□□ 0.03
CCDC78-210ENST00000478979 AP1G2O75843 785 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 RPL13P26373 211 aaKnown RBP15.22■□□□□ 0.03
CCDC78-210ENST00000478979 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 EPM2AIP1Q7L775 607 aaPredicted RBP15.22■□□□□ 0.03
CCDC78-210ENST00000478979 DAAM2Q86T65 1068 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 LARGE2Q8N3Y3 721 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 EDEM3Q9BZQ6 932 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 PARVGQ9HBI0 331 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 ETAA1Q9NY74 926 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 ANKRD33BA6NCL7 494 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 RBAK-RBAKDNI3L0D1 243 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 IRF6O14896 467 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 MTMR3Q13615 1198 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 ZNF317Q96PQ6 595 aaPredicted RBP15.22■□□□□ 0.03
CCDC78-210ENST00000478979 YIPF3Q9GZM5 350 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
CCDC78-210ENST00000478979 EVI5O60447 810 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 EXOC3O60645 756 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 MARSP56192 900 aaKnown RBP15.21■□□□□ 0.03
CCDC78-210ENST00000478979 IL31RAQ8NI17 732 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 HSD17B14Q9BPX1 270 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 CNOT10Q9H9A5 744 aaKnown RBP15.21■□□□□ 0.03
CCDC78-210ENST00000478979 GREB1LQ9C091 1923 aaPredicted RBP15.21■□□□□ 0.03
CCDC78-210ENST00000478979 TBX3O15119 743 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 ITGA4P13612 1032 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 KCNJ2P63252 427 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 PEX26Q7Z412 305 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 OGFOD1Q8N543 542 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 CCDC26Q8TAB7 109 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 SIX2Q9NPC8 291 aa15.21■□□□□ 0.03
CCDC78-210ENST00000478979 ZNF70Q9UC06 446 aaPredicted RBP15.21■□□□□ 0.03
CCDC78-210ENST00000478979 ZMYM2Q9UBW7 1377 aa15.21■□□□□ 0.02
CCDC78-210ENST00000478979 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 CFAP73A6NFT4 308 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 TMEM110-MUSTN1A8MSY1 372 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 IPO5O00410 1097 aaKnown RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 NFIBO00712 420 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 DAPK3O43293 454 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SP4Q02446 784 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SLMAPQ14BN4 828 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 CEP55Q53EZ4 464 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 ZNF746Q6NUN9 644 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 MOXD1Q6UVY6 613 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 C1orf186Q6ZWK4 172 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 TMC3Q7Z5M5 1100 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 PALB2Q86YC2 1186 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 PRCCQ92733 491 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 FAM84AQ96KN4 292 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 CALR3Q96L12 384 aaKnown RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 HOMER3Q9NSC5 361 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 DNAJC12Q9UKB3 198 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 K7ENM7 598 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 DDX3XO00571 662 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SART1O43290 800 aaKnown RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 HIP1RO75146 1068 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 PSMD10O75832 226 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 MMEP08473 750 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 ALAS1P13196 640 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 CHN1P15882 459 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 PRELPP51888 382 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 DLG4P78352 724 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 DRAP1Q14919 205 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 HS2ST1Q7LGA3 356 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 SYN2Q92777 582 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-210ENST00000478979 TAS2R14Q9NYV8 317 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 F8VZ95 297 aa15.2■□□□□ 0.02
CCDC78-210ENST00000478979 FLOT1O75955 427 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms