RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 H2AFY2Q9P0M6 372 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 HECAQ9UBI9 543 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 B4GALT6Q9UBX8 382 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 PCDHB6Q9Y5E3 794 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 DMRT1Q9Y5R6 373 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 PPP1R12AO14974 1030 aaPredicted RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 PLSCR1O15162 318 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 KCNQ2O43526 872 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 NRP2O60462 931 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 PRAMEF4O60810 478 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 ALDH1A2O94788 518 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 RHOBTB3O94955 611 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 NUDT3O95989 172 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 KRT10P13645 584 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 HSP90B1P14625 803 aaKnown RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 MECP2P51608 486 aaKnown RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 NRG3P56975 720 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 MXRA7P84157 204 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 OCRLQ01968 901 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 PPARAQ07869 468 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 PABPC4Q13310 644 aaKnown RBP eCLIP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 TOB2Q14106 344 aaPredicted RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 TCEA2Q15560 299 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 C21orf62-AS1Q17RA5 79 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 ESRP1Q6NXG1 681 aaKnown RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 LRRC55Q6ZSA7 311 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 ZNF627Q7L945 461 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 NPM2Q86SE8 214 aaKnown RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 NXPE1Q8N323 547 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 CDYL2Q8N8U2 506 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 GLB1L3Q8NCI6 653 aaPredicted RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 MDGA1Q8NFP4 955 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 NKD2Q969F2 451 aaPredicted RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 C16orf92Q96LL3 132 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 GPR101Q96P66 508 aaPredicted RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 SPON1Q9HCB6 807 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 ING3Q9NXR8 418 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 TRPM5Q9NZQ8 1165 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 MAGEC2Q9UBF1 373 aaPredicted RBP2.07□□□□□ -2.08
SRRM1-211ENST00000478890 ZNHIT2Q9UHR6 403 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 MSRAQ9UJ68 235 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 SPO11Q9Y5K1 396 aa2.07□□□□□ -2.08
SRRM1-211ENST00000478890 KLRG2A4D1S0 409 aaPredicted RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 ZNF891A8MT65 544 aaPredicted RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 PRR5-ARHGAP8B1AHC4 643 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 MTSS1O43312 755 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 STC2O76061 302 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 ITGB1P05556 798 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 ATP2A2P16615 1042 aaKnown RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 LAG3P18627 525 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 SDSP20132 328 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 CASRP41180 1078 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 SCNN1BP51168 640 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 RABGGTBP53611 331 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 USP14P54578 494 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 SLC25A3Q00325 362 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 MGAT5Q09328 741 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 SQSTM1Q13501 440 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 DCAF17Q5H9S7 520 aaPredicted RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 UNQ6494/PRO21346Q6UXR6 183 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 APBB1IPQ7Z5R6 666 aaPredicted RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 FAM83AQ86UY5 434 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 HOMER1Q86YM7 354 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 GLB1L2Q8IW92 636 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 UNC5BQ8IZJ1 945 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 LCORLQ8N3X6 602 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 EFHBQ8N7U6 833 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 JMYQ8N9B5 988 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 SUPT20HQ8NEM7 779 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 CHTF18Q8WVB6 975 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 APPBP2Q92624 585 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 CAVIN3Q969G5 261 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 IL17RAQ96F46 866 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 CDC5LQ99459 802 aaKnown RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 AGAP2Q99490 1192 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 PITHD1Q9GZP4 211 aaPredicted RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 RIOX1Q9H6W3 641 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 INTS7Q9NVH2 962 aaKnown RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 GPRC5BQ9NZH0 403 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 POGKQ9P215 609 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 USP36Q9P275 1121 aaKnown RBP2.06□□□□□ -2.08
SRRM1-211ENST00000478890 KCNG1Q9UIX4 513 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 CD2APQ9Y5K6 639 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 MYPNQ86TC9 1320 aa2.06□□□□□ -2.08
SRRM1-211ENST00000478890 A0A0A6YYJ9 748 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CYSRT1A8MQ03 144 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 TRIM24O15164 1050 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 FOXN1O15353 648 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 B3GALT2O43825 422 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 KDM1AO60341 852 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 DNAJC6O75061 913 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CDC45O75419 566 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 GCP02774 474 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 SPATA31D3P0C874 917 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 GAAP10253 952 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CDK4P11802 303 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 APOBEC3AP31941 199 aaPredicted RBP2.05□□□□□ -2.08
SRRM1-211ENST00000478890 LSP1P33241 339 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 GZMKP49863 264 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 WNT3AP56704 352 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms