RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
VLDLR-204ENST00000478776 GRXCR1A8MXD5 290 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 ENPP3O14638 875 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 DVL2O14641 736 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
VLDLR-204ENST00000478776 GLRX3O76003 335 aaKnown RBP4.81□□□□□ -1.64
VLDLR-204ENST00000478776 STC2O76061 302 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 CD38P28907 300 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 IGFALSP35858 605 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 ATXN1P54253 815 aaKnown RBP4.81□□□□□ -1.64
VLDLR-204ENST00000478776 FAM214AQ32MH5 1076 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 IQSEC1Q6DN90 963 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 OLFML1Q6UWY5 402 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 ADGRG3Q86Y34 549 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 LCORLQ8N3X6 602 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 NOL10Q9BSC4 688 aaKnown RBP4.81□□□□□ -1.64
VLDLR-204ENST00000478776 MTG2Q9H4K7 406 aa4.81□□□□□ -1.64
VLDLR-204ENST00000478776 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 A0A0A6YYJ9 748 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 GRID2IPA4D2P6 1211 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 OPA1O60313 960 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 RFPL3O75679 317 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 DNAJC8O75937 253 aaPredicted RBP4.8□□□□□ -1.64
VLDLR-204ENST00000478776 PRPF6O94906 941 aaKnown RBP4.8□□□□□ -1.64
VLDLR-204ENST00000478776 PTX3P26022 381 aaPredicted RBP4.8□□□□□ -1.64
VLDLR-204ENST00000478776 FLT3P36888 993 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 MYBPC3Q14896 1274 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 UBE2R2Q712K3 238 aaPredicted RBP4.8□□□□□ -1.64
VLDLR-204ENST00000478776 PRIMA1Q86XR5 153 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 SYNPOQ8N3V7 929 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 SLC46A2Q9BY10 475 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 HAPLN2Q9GZV7 340 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 KCNH6Q9H252 994 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 ING3Q9NXR8 418 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 HS3ST4Q9Y661 456 aa4.8□□□□□ -1.64
VLDLR-204ENST00000478776 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 DNAJC6O75061 913 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 ALDH1A2O94788 518 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 SLC9A1P19634 815 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 AVPR1BP47901 424 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 C21orf58P58505 322 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 HNRNPA0Q13151 305 aaKnown RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 ERCC6LQ2NKX8 1250 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 DALRD3Q5D0E6 543 aaKnown RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 METTL24Q5JXM2 366 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 KIAA0907Q7Z7F0 614 aaPredicted RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 DHX37Q8IY37 1157 aaKnown RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 ZZZ3Q8IYH5 903 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 BEND2Q8NDZ0 799 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 MYEOVQ96EZ4 313 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 NAF1Q96HR8 494 aaKnown RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 DCLRE1CQ96SD1 692 aaKnown RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 PDCD2LQ9BRP1 358 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 MYL10Q9BUA6 226 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 PITHD1Q9GZP4 211 aaPredicted RBP4.79□□□□□ -1.64
VLDLR-204ENST00000478776 TRPM5Q9NZQ8 1165 aa4.79□□□□□ -1.64
VLDLR-204ENST00000478776 RNASET2O00584 256 aaKnown RBP4.78□□□□□ -1.64
VLDLR-204ENST00000478776 OPHN1O60890 802 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 ASLP04424 464 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 ZNF460Q14592 562 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 VPS72Q15906 364 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 KIAA1841Q6NSI8 718 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 NINJ1Q92982 152 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 CAVIN3Q969G5 261 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 ELF4Q99607 663 aaPredicted RBP4.78□□□□□ -1.64
VLDLR-204ENST00000478776 FEZ1Q99689 392 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 NDC1Q9BTX1 674 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 POFUT1Q9H488 388 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 ZNF768Q9H5H4 540 aaKnown RBP4.78□□□□□ -1.64
VLDLR-204ENST00000478776 TOMM22Q9NS69 142 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.78□□□□□ -1.64
VLDLR-204ENST00000478776 CLCA2Q9UQC9 943 aa4.78□□□□□ -1.64
VLDLR-204ENST00000478776 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 GAAP10253 952 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 HSP90B1P14625 803 aaKnown RBP4.77□□□□□ -1.65
VLDLR-204ENST00000478776 HSD3B2P26439 372 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 ZEB1P37275 1124 aaPredicted RBP4.77□□□□□ -1.65
VLDLR-204ENST00000478776 CASRP41180 1078 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 GYS2P54840 703 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 PIK3R6Q5UE93 754 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 CNNM4Q6P4Q7 775 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 KANSL1Q7Z3B3 1105 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 GDF7Q7Z4P5 450 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 NIM1KQ8IY84 436 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 UNC5BQ8IZJ1 945 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 IL17RAQ96F46 866 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 BBC3Q96PG8 261 aaPredicted RBP4.77□□□□□ -1.65
VLDLR-204ENST00000478776 WDR11Q9BZH6 1224 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 SERHL2Q9H4I8 314 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 ANKFY1Q9P2R3 1169 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 B4GALT6Q9UBX8 382 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 ZKSCAN5Q9Y2L8 839 aa4.77□□□□□ -1.65
VLDLR-204ENST00000478776 ST20-MTHFSA0A0A6YYL1 179 aa4.76□□□□□ -1.65
VLDLR-204ENST00000478776 AHRRA9YTQ3 701 aa4.76□□□□□ -1.65
VLDLR-204ENST00000478776 PRR5-ARHGAP8B1AHC4 643 aa4.76□□□□□ -1.65
VLDLR-204ENST00000478776 LPXNO60711 386 aa4.76□□□□□ -1.65
VLDLR-204ENST00000478776 PCDH8O95206 1070 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms