RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 MRPL10Q7Z7H8 261 aaKnown RBP25.41■■□□□ 1.66
C9orf3-216ENST00000478603 ZNF280BQ86YH2 543 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 VPS52Q8N1B4 723 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 AUTS2Q8WXX7 1259 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 RSPH1Q8WYR4 309 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 SUSD6Q92537 303 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 IGSF21Q96ID5 467 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 CCDC43Q96MW1 224 aaKnown RBP25.41■■□□□ 1.66
C9orf3-216ENST00000478603 S1PR5Q9H228 398 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 RSAD1Q9HA92 442 aa25.41■■□□□ 1.66
C9orf3-216ENST00000478603 LOC730098B7Z3J9 87 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 DGAT1O75907 488 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 ERLIN2O94905 339 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 CXCL14O95715 111 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 SLC11A1P49279 550 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 CAPSQ13938 189 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 CPB2Q96IY4 423 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 RPGRIP1Q96KN7 1286 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 PHF7Q9BWX1 381 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-216ENST00000478603 ZBP1Q9H171 429 aa25.4■■□□□ 1.66
C9orf3-216ENST00000478603 INO80B-WBP1J3KQ70 363 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 TSPAN1O60635 241 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 CLASP2O75122 1294 aaKnown RBP25.39■■□□□ 1.66
C9orf3-216ENST00000478603 DDHD2O94830 711 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.66
C9orf3-216ENST00000478603 SPATA31C1P0DKV0 1188 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 ARL2P36404 184 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 TFDP1Q14186 410 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 ZNF174Q15697 407 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 HERC4Q5GLZ8 1057 aaPredicted RBP25.39■■□□□ 1.66
C9orf3-216ENST00000478603 SMG8Q8ND04 991 aaKnown RBP25.39■■□□□ 1.66
C9orf3-216ENST00000478603 URGCPQ8TCY9 931 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 KIF2CQ99661 725 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 LLPHQ9BRT6 129 aaKnown RBP25.39■■□□□ 1.66
C9orf3-216ENST00000478603 EIF2AQ9BY44 585 aaKnown RBP25.39■■□□□ 1.66
C9orf3-216ENST00000478603 CDH22Q9UJ99 828 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 HCFC2Q9Y5Z7 792 aa25.39■■□□□ 1.66
C9orf3-216ENST00000478603 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.38■■□□□ 1.65
C9orf3-216ENST00000478603 USO1O60763 962 aaKnown RBP25.38■■□□□ 1.65
C9orf3-216ENST00000478603 GLRA2P23416 452 aa25.38■■□□□ 1.65
C9orf3-216ENST00000478603 PLA2G5P39877 138 aa25.38■■□□□ 1.65
C9orf3-216ENST00000478603 C8orf34Q49A92 452 aa25.38■■□□□ 1.65
C9orf3-216ENST00000478603 DDX53Q86TM3 631 aaKnown RBP25.38■■□□□ 1.65
C9orf3-216ENST00000478603 VN1R3Q9BXE9 311 aa25.38■■□□□ 1.65
C9orf3-216ENST00000478603 TECTAO75443 2155 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 MED24O75448 989 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 POMCP01189 267 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 NCLP19338 710 aaKnown RBP25.37■■□□□ 1.65
C9orf3-216ENST00000478603 MBTD1Q05BQ5 628 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 BMS1Q14692 1282 aaKnown RBP25.37■■□□□ 1.65
C9orf3-216ENST00000478603 CBX2Q14781 532 aaPredicted RBP25.37■■□□□ 1.65
C9orf3-216ENST00000478603 MAEAQ7L5Y9 396 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 CATSPER3Q86XQ3 398 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 IFNLR1Q8IU57 520 aaPredicted RBP25.37■■□□□ 1.65
C9orf3-216ENST00000478603 CASP10Q92851 521 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 FAM122AQ96E09 287 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 POLR3FQ9H1D9 316 aaPredicted RBP25.37■■□□□ 1.65
C9orf3-216ENST00000478603 RNF39Q9H2S5 420 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 GPRC5CQ9NQ84 441 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 IPPQ9Y573 584 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 TDRD15B5MCY1 1934 aaKnown RBP25.37■■□□□ 1.65
C9orf3-216ENST00000478603 CNTNAP2Q9UHC6 1331 aa25.37■■□□□ 1.65
C9orf3-216ENST00000478603 CTSAP10619 480 aa25.36■■□□□ 1.65
C9orf3-216ENST00000478603 ITGA4P13612 1032 aa25.36■■□□□ 1.65
C9orf3-216ENST00000478603 AMHR2Q16671 573 aa25.36■■□□□ 1.65
C9orf3-216ENST00000478603 NOTUMQ6P988 496 aa25.36■■□□□ 1.65
C9orf3-216ENST00000478603 ZSCAN31Q96LW9 406 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-216ENST00000478603 FAM193BQ96PV7 902 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-216ENST00000478603 FOXP1Q9H334 677 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-216ENST00000478603 HES2Q9Y543 173 aa25.36■■□□□ 1.65
C9orf3-216ENST00000478603 OR52Z1P0C646 297 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 HOXB8P17481 243 aaPredicted RBP25.35■■□□□ 1.65
C9orf3-216ENST00000478603 SP100P23497 879 aaPredicted RBP25.35■■□□□ 1.65
C9orf3-216ENST00000478603 AXLP30530 894 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 POU5F1BQ06416 359 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 FBXO18Q8NFZ0 1043 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 APOL6Q9BWW8 343 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 TUFT1Q9NNX1 390 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 KANSL3Q9P2N6 904 aa25.35■■□□□ 1.65
C9orf3-216ENST00000478603 CARNS1A5YM72 827 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 B4GALT5O43286 388 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 XRCC6P12956 609 aaKnown RBP eCLIP25.34■■□□□ 1.65
C9orf3-216ENST00000478603 ARF4P18085 180 aaPredicted RBP25.34■■□□□ 1.65
C9orf3-216ENST00000478603 HMGN5P82970 282 aaKnown RBP25.34■■□□□ 1.65
C9orf3-216ENST00000478603 PCBP1Q15365 356 aaKnown RBP eCLIP25.34■■□□□ 1.65
C9orf3-216ENST00000478603 POTEGQ6S5H5 508 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 CDR2LQ86X02 465 aaPredicted RBP25.34■■□□□ 1.65
C9orf3-216ENST00000478603 FAM184AQ8NB25 1140 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 TMEM87AQ8NBN3 555 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 CNNM3Q8NE01 707 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 GAD1Q99259 594 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 CSRNP2Q9H175 543 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 FAN1Q9Y2M0 1017 aa25.34■■□□□ 1.65
C9orf3-216ENST00000478603 TRIOO75962 3097 aa25.33■■□□□ 1.65
C9orf3-216ENST00000478603 ALDH2P05091 517 aa25.33■■□□□ 1.65
C9orf3-216ENST00000478603 SSBP05455 408 aaKnown RBP eCLIP25.33■■□□□ 1.65
C9orf3-216ENST00000478603 MLH1P40692 756 aa25.33■■□□□ 1.65
C9orf3-216ENST00000478603 NCBP1Q09161 790 aaKnown RBP25.33■■□□□ 1.65
C9orf3-216ENST00000478603 NBR1Q14596 966 aa25.33■■□□□ 1.65
C9orf3-216ENST00000478603 TPRNQ4KMQ1 711 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms