RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KMT5AQ9NQR1 393 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 FAM13BQ9NYF5 915 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 KCND2Q9NZV8 630 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 USP20Q9Y2K6 914 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 TRIP11Q15643 1979 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 TBKBP1A7MCY6 615 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 POLR2DO15514 142 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PLS3P13797 630 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 ARF4P18085 180 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 POU5F1BQ06416 359 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 NCBP1Q09161 790 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 MAPK6Q16659 721 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 ECHDC2Q86YB7 292 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 IFNLR1Q8IU57 520 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 MYCT1Q8N699 235 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 LPPQ93052 612 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 TRIM6Q9C030 488 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 CHST12Q9NRB3 414 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PRMT7Q9NVM4 692 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 MYO7AQ13402 2215 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 VCANP13611 3396 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 CITO14578 2027 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PRRC2BQ5JSZ5 2229 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 A0A1B0GVL5 298 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 LINC01553A4QN01 128 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 MYMKA6NI61 221 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 TTLL13PA6NNM8 815 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 K7ENM7 598 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 DGKIO75912 1065 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 EDN1P05305 212 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 IDEP14735 1019 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PFKFB1P16118 471 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 HOXA11P31270 313 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 EFNA5P52803 228 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 SMTNP53814 917 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 HTRA4P83105 476 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 TAP1Q03518 808 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PRPF4BQ13523 1007 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 GIT2Q14161 759 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 BTG3Q14201 252 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PCBP1Q15365 356 aaKnown RBP eCLIP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 AMHR2Q16671 573 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 GPR153Q6NV75 609 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 ABI1Q8IZP0 508 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 IQUBQ8NA54 791 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 ARNTL2Q8WYA1 636 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 DDX12PQ92771 950 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 APOL6Q9BWW8 343 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 EIF2AQ9BY44 585 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 CCDC113Q9H0I3 377 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 SEMA6BQ9H3T3 888 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PRDM12Q9H4Q4 367 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PARVGQ9HBI0 331 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 TMEM161AQ9NX61 479 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 LARSQ9P2J5 1176 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 KCNH3Q9ULD8 1083 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 ODF2LQ9ULJ1 636 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 CIZ1Q9ULV3 898 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PCDHB2Q9Y5E7 798 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PHLPP2Q6ZVD8 1323 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 CNTNAP2Q9UHC6 1331 aa7.6□□□□□ -1.19
BRCA1-215ENST00000478531 PLXNA4Q9HCM2 1894 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 ATG2AQ2TAZ0 1938 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 TMEM265A0A087WTH1 108 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 A0A0U1RQF3 1178 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 K7ERI5 159 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 NPTXRO95502 500 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-215ENST00000478531 AXLP30530 894 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 RAB27AP51159 221 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 E2F4Q16254 413 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 SPOUT1Q5T280 376 aaKnown RBP7.59□□□□□ -1.19
BRCA1-215ENST00000478531 ADALQ6DHV7 355 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 CRIPAKQ8N1N5 446 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 FIBCD1Q8N539 461 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 FSIP1Q8NA03 581 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 HELQQ8TDG4 1101 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 GDPD5Q8WTR4 605 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 BICD1Q96G01 975 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 PRIMPOLQ96LW4 560 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 C17orf80Q9BSJ5 609 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 C17orf75Q9HAS0 396 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 ARHGAP28Q9P2N2 729 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 HCSTQ9UBK5 93 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 INPP5FQ9Y2H2 1132 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 HES2Q9Y543 173 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 C5orf42Q9H799 3197 aa7.59□□□□□ -1.19
BRCA1-215ENST00000478531 GOLGA6L4A6NEF3 574 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 EPOPA6NHQ4 379 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 ACKR2O00590 384 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 HOXA2O43364 376 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 CSPG5O95196 566 aa7.59□□□□□ -1.2
BRCA1-215ENST00000478531 HARSP12081 509 aaKnown RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms