RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SRRM1Q8IYB3 904 aaKnown RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 PROM2Q8N271 834 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 MAGEB18Q96M61 343 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 LRRC37BQ96QE4 947 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 TIPINQ9BVW5 301 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 DMAP1Q9NPF5 467 aaPredicted RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 TAS2R14Q9NYV8 317 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 BIN2Q9UBW5 565 aaPredicted RBP10.57□□□□□ -0.72
COL13A1-207ENST00000478219 BLOC1S6Q9UL45 172 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 ASAP1Q9ULH1 1129 aa10.57□□□□□ -0.72
COL13A1-207ENST00000478219 COL18A1P39060 1754 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 PLSCR1O15162 318 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 SLC37A4O43826 429 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 GFPT2O94808 682 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 PSMC4P43686 418 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 DHX34Q14147 1143 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 WASHC2DQ5SRD0 308 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 RBM12BQ8IXT5 1001 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 RAD54LQ92698 747 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 STMN4Q9H169 189 aaPredicted RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 DHX36Q9H2U1 1008 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 DCLRE1BQ9H816 532 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 SH3GLB2Q9NR46 395 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 KRT82Q9NSB4 513 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 USP40Q9NVE5 1235 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 TMEM260Q9NX78 707 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 MAD2L2Q9UI95 211 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 GRID1Q9ULK0 1009 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 KCPQ6ZWJ8 1503 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 CASZ1Q86V15 1759 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 hCG_2014768A0A024R1R8 64 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 EDIL3O43854 480 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 PHF2O75151 1096 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 EPS15P42566 896 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 YARSP54577 528 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 DYNC1I2Q13409 638 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 MOGSQ13724 837 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 KYNUQ16719 465 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 TAF1BQ53T94 588 aaPredicted RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 CCDC137Q6PK04 289 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 SYCE1Q8N0S2 351 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 TBCKQ8TEA7 893 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 SCFD1Q8WVM8 642 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 INPP5DQ92835 1189 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 ART4Q93070 314 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 NAP1L3Q99457 506 aaPredicted RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 CADM1Q9BY67 442 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 CARD9Q9H257 536 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 SIX2Q9NPC8 291 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 MTRF1LQ9UGC7 380 aaKnown RBP10.56□□□□□ -0.72
COL13A1-207ENST00000478219 ZNF232Q9UNY5 417 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
COL13A1-207ENST00000478219 MROH7Q68CQ1 1323 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 PITPNM2Q9BZ72 1349 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 DCCP43146 1447 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 A0A0A6YYK5 440 aaPredicted RBP10.55□□□□□ -0.72
COL13A1-207ENST00000478219 CAPN9O14815 690 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 ECE2O60344 883 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 PRKCIP41743 596 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 BPIFB4P59827 614 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 KPNB1Q14974 876 aaKnown RBP10.55□□□□□ -0.72
COL13A1-207ENST00000478219 CCDC6Q16204 474 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 FAM26FQ5R3K3 315 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 KIAA0825Q8IV33 1275 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 WDR60Q8WVS4 1066 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 RBM17Q96I25 401 aaKnown RBP10.55□□□□□ -0.72
COL13A1-207ENST00000478219 GBP5Q96PP8 586 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 TUBGCP5Q96RT8 1024 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 KCTD10Q9H3F6 313 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 ETNK2Q9NVF9 386 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 CTTNBP2NLQ9P2B4 639 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 STOML1Q9UBI4 398 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 TRMT112Q9UI30 125 aaKnown RBP10.55□□□□□ -0.72
COL13A1-207ENST00000478219 HDAC9Q9UKV0 1011 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 TSPY2A6NKD2 308 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 SPAG7O75391 227 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 TDP2O95551 362 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 EYA4O95677 639 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 GSTA2P09210 222 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 FGFR1P11362 822 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 MAGEA8P43361 318 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 CASP5P51878 434 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 RTP1P59025 263 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 USP46P62068 366 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 SETDB1Q15047 1291 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 RASIP1Q5U651 963 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 LRRC74BQ6ZQY2 392 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 RFX8Q6ZV50 586 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 MYLK4Q86YV6 388 aaPredicted RBP10.55□□□□□ -0.72
COL13A1-207ENST00000478219 DAGLBQ8NCG7 672 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 PNMA1Q8ND90 353 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 SPATA16Q9BXB7 569 aa10.55□□□□□ -0.72
COL13A1-207ENST00000478219 THAP2Q9H0W7 228 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms