RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 C2CD2LO14523 706 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 MSH4O15457 936 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 TEX28O15482 410 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 CHMP2AO43633 222 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 GAS7O60861 476 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 CDC27P30260 824 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 AK2P54819 239 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 MTERF2Q49AM1 385 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 DCLK2Q8N568 766 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 SUMF1Q8NBK3 374 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 CCDC12Q8WUD4 166 aaPredicted RBP22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 SMG7Q92540 1137 aaKnown RBP22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 ZNF707Q96C28 371 aaPredicted RBP22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 UNC45AQ9H3U1 944 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 SLC2A4RGQ9NR83 387 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 AGPAT5Q9NUQ2 364 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 SSX2IPQ9Y2D8 614 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 FAN1Q9Y2M0 1017 aa22.77■■□□□ 1.24
PDLIM1-202ENST00000477757 NRP1O14786 923 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 RFPL2O75678 378 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 AFF1P51825 1210 aaKnown RBP22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 RCAN1P53805 252 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 HTR4Q13639 388 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 PJA1Q8NG27 643 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 CNTNAP3BQ96NU0 1288 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 CNTNAP3Q9BZ76 1288 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 RSAD1Q9HA92 442 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 MARCH5Q9NX47 278 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 KANSL3Q9P2N6 904 aa22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 SUCLA2Q9P2R7 463 aaPredicted RBP22.76■■□□□ 1.23
PDLIM1-202ENST00000477757 TMEM150BA6NC51 233 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 ANHXE9PGG2 379 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 STBD1O95210 358 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 EFEMP2O95967 443 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 ALDH2P05091 517 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 GLULP15104 373 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 XKR3Q5GH77 459 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 LRCH2Q5VUJ6 765 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 DCLRE1AQ6PJP8 1040 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 MRPL10Q7Z7H8 261 aaKnown RBP22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 RHPN2Q8IUC4 686 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 RNF168Q8IYW5 571 aaPredicted RBP22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 RDM1Q8NG50 284 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 SLC5A5Q92911 643 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 TCEANC2Q96MN5 208 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 FAM193BQ96PV7 902 aaPredicted RBP22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 TEKT3Q9BXF9 490 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 RXFP1Q9HBX9 757 aa22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.75■■□□□ 1.23
PDLIM1-202ENST00000477757 KLF18A0A0U1RQI7 1052 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 POTEMA6NI47 508 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 KINO60870 393 aaKnown RBP22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 KRT37O76014 449 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 GLUD2P49448 558 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 EXOSC10Q01780 885 aaKnown RBP22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 RSPO4Q2I0M5 234 aaPredicted RBP22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 POTEGQ6S5H5 508 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 MAML2Q8IZL2 1156 aaPredicted RBP22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 HDAC7Q8WUI4 952 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 NLRP4Q96MN2 994 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 ESYT1Q9BSJ8 1104 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 FOXQ1Q9C009 403 aa22.74■■□□□ 1.23
PDLIM1-202ENST00000477757 MAFO75444 373 aaPredicted RBP22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 C1RP00736 705 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 LAMP2P13473 410 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 GNA11P29992 359 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 KIAA0319Q5VV43 1072 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 KSR1Q8IVT5 923 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 IFT122Q9HBG6 1241 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 ZDHHC7Q9NXF8 308 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 PRG3Q9Y2Y8 225 aaPredicted RBP22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 SPTBN2O15020 2390 aa22.73■■□□□ 1.23
PDLIM1-202ENST00000477757 CACNA1IQ9P0X4 2223 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 SPTLC1O15269 473 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 EDIL3O43854 480 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 POMCP01189 267 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 STARD6P59095 220 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 ZNF528Q3MIS6 628 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 GET4Q7L5D6 327 aaPredicted RBP22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 DHX32Q7L7V1 743 aaKnown RBP22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 TAS1R1Q7RTX1 841 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 MIER3Q7Z3K6 550 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 CCDC136Q96JN2 1154 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 SH2D3AQ9BRG2 576 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 PLEKHA4Q9H4M7 779 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 NUMBLQ9Y6R0 609 aa22.72■■□□□ 1.23
PDLIM1-202ENST00000477757 PATJQ8NI35 1801 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 ZFHX4Q86UP3 3567 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 PSMD10O75832 226 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 MYBP10242 640 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 ADD1P35611 737 aaKnown RBP22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 DSG1Q02413 1049 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 UBXN11Q5T124 520 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 RNF20Q5VTR2 975 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 COLGALT2Q8IYK4 626 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 BICD2Q8TD16 824 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 BORCS6Q96GS4 357 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 JPH2Q9BR39 696 aaPredicted RBP22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 NT5C3AQ9H0P0 336 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms