RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 BCAR3O75815 825 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 GNAI3P08754 354 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 UQCRFS1P1P0C7P4 283 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 VCAM1P19320 739 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 RNF4P78317 190 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 LMNB2Q03252 620 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 GABPAQ06546 454 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 SLC14A2Q15849 920 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 TNNI3KQ59H18 835 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 PRAMEF19Q5SWL8 479 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 GORABQ5T7V8 394 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 LBX2Q6XYB7 198 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 MIGA1Q8NAN2 632 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 USP38Q8NB14 1042 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 GATAD2BQ8WXI9 593 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 ARHGAP45Q92619 1136 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 LPAR1Q92633 364 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 TRIM43Q96BQ3 446 aaPredicted RBP5.58□□□□□ -1.52
CKS1B-207ENST00000477676 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
CKS1B-207ENST00000477676 GPR108Q9NPR9 543 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 GINM1Q9NU53 330 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 DDX20Q9UHI6 824 aaKnown RBP5.58□□□□□ -1.52
CKS1B-207ENST00000477676 FPGT-TNNI3KV9GXZ4 949 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 SCN5AQ14524 2016 aa5.58□□□□□ -1.52
CKS1B-207ENST00000477676 TRIP12Q14669 1992 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 PTPRSQ13332 1948 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 ANKRD33BA6NCL7 494 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 DNM1LO00429 736 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 PRICKLE3O43900 615 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 EFEMP2O95967 443 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 GNAI2P04899 355 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 CT47B1P0C2W7 299 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 ENDOUP21128 410 aaKnown RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 VIPR1P32241 457 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 G3BP1Q13283 466 aaKnown RBP eCLIP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 SEPT2Q15019 361 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 TRIM60Q495X7 471 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 TTC39AQ5SRH9 613 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 TMCO4Q5TGY1 634 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 CNKSR3Q6P9H4 555 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 SLC39A5Q6ZMH5 540 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 RNF111Q6ZNA4 994 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 CRACR2BQ8N4Y2 399 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 TMEM57Q8N5G2 664 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 SSH3Q8TE77 659 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 LINC01599Q8WXQ3 324 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 BADQ92934 168 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 EAF2Q96CJ1 260 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 CRELD1Q96HD1 420 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 ZNF512BQ96KM6 892 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 KREMEN1Q96MU8 473 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 RIOK1Q9BRS2 568 aaKnown RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 MOV10L1Q9BXT6 1211 aaKnown RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 KIAA1683Q9H0B3 1180 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 CCDC8Q9H0W5 538 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 RPAP3Q9H6T3 665 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-207ENST00000477676 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 KLHL3Q9UH77 587 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 ZMYM5Q9UJ78 669 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 ATP11BQ9Y2G3 1177 aa5.57□□□□□ -1.52
CKS1B-207ENST00000477676 ABLIM1O14639 778 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 CILPO75339 1184 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 BAG3O95817 575 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 CHGBP05060 677 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 CYP2D6P10635 497 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 ADORA2AP29274 412 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 CNGA1P29973 690 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 ADCYAP1R1P41586 468 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 PCBP3P57721 371 aaKnown RBP5.56□□□□□ -1.52
CKS1B-207ENST00000477676 TEKQ02763 1124 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 TLE2Q04725 743 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 RAD51AP2Q09MP3 1159 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 CAMK2GQ13555 558 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-207ENST00000477676 RTP5Q14D33 572 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 RAB3GAP1Q15042 981 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 LRRC41Q15345 812 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 CERKLQ49MI3 558 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-207ENST00000477676 FAM47AQ5JRC9 791 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 MEI1Q5TIA1 1274 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 WDR78Q5VTH9 848 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 MFSD14CQ5VZR4 134 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 ATF7IPQ6VMQ6 1270 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 FAM129CQ86XR2 697 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 MAGEB6Q8N7X4 407 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 LINC01356Q8N9X3 169 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 TP53I13Q8NBR0 393 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-207ENST00000477676 SLC44A5Q8NCS7 719 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 PHC3Q8NDX5 983 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 MAFAQ8NHW3 353 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-207ENST00000477676 FERMT2Q96AC1 680 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 PARP2Q9UGN5 583 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 SERPINB13Q9UIV8 391 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 TLR6Q9Y2C9 796 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 NOP58Q9Y2X3 529 aaKnown RBP5.56□□□□□ -1.52
CKS1B-207ENST00000477676 LRRC37A2A6NM11 1700 aa5.56□□□□□ -1.52
CKS1B-207ENST00000477676 PIEZO1Q92508 2521 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 TCRBV5S4A2TA0A5A2 114 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 RBM47A0AV96 593 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms