RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 FAM13CQ8NE31 585 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 ERP27Q96DN0 273 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 TMX4Q9H1E5 349 aaPredicted RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 MYLK2Q9H1R3 596 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 LRMDAQ9H2I8 198 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 KCTD10Q9H3F6 313 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.43□□□□□ -0.1
DFFB-209ENST00000477548 HAO1Q9UJM8 370 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 AJAP1Q9UKB5 411 aaPredicted RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 NPHP3-ACAD11A0A0J9YXS1 232 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 ATP5HO75947 161 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 CCDC15Q0P6D6 951 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 PDIA5Q14554 519 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 CAVIN4Q5BKX8 364 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 CCDC137Q6PK04 289 aaKnown RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 APBB1IPQ7Z5R6 666 aaPredicted RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.43□□□□□ -0.1
DFFB-209ENST00000477548 ANKLE1Q8NAG6 615 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 ASAP3Q8TDY4 903 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 ALG3Q92685 438 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 EZH1Q92800 747 aaPredicted RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 PITPNM3Q9BZ71 974 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 SEPT11Q9NVA2 429 aaKnown RBP14.43□□□□□ -0.1
DFFB-209ENST00000477548 USP40Q9NVE5 1235 aa14.43□□□□□ -0.1
DFFB-209ENST00000477548 ATP8B3O60423 1300 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 PITPNM2Q9BZ72 1349 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 PALM3A6NDB9 673 aaPredicted RBP14.42□□□□□ -0.1
DFFB-209ENST00000477548 ABCD1P33897 745 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 ADCY1Q08828 1119 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CGB2Q6NT52 195 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 DPY19L2P1Q6NXN4 242 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 TRIM74Q86UV6 250 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 TRIM73Q86UV7 250 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CCDC105Q8IYK2 499 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 B4GALNT2Q8NHY0 566 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 LNX1Q8TBB1 728 aaPredicted RBP14.42□□□□□ -0.1
DFFB-209ENST00000477548 DYNLL2Q96FJ2 89 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 LZTS2Q9BRK4 669 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 NKIRAS1Q9NYS0 192 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CTNNAL1Q9UBT7 734 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 UTRNP46939 3433 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 ZNF804BA4D1E1 1349 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 IGSF9BQ9UPX0 1349 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 TMEM253P0C7T8 217 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 GM2AP17900 193 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 STAT1P42224 750 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 SESN3P58005 492 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 MECOMQ03112 1051 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 PPATQ06203 517 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 MTFR1Q15390 333 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CMPK2Q5EBM0 449 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 PRELID2Q8N945 189 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 SERPINB12Q96P63 405 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 GORASP1Q9BQQ3 440 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CDCA7Q9BWT1 371 aaPredicted RBP14.42□□□□□ -0.1
DFFB-209ENST00000477548 PPP1R12CQ9BZL4 782 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.42□□□□□ -0.1
DFFB-209ENST00000477548 GCNT4Q9P109 453 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 RNF8O76064 485 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 VCAM1P19320 739 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 LMNB1P20700 586 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CUL3Q13618 768 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 EDRF1Q3B7T1 1238 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 SBK1Q52WX2 424 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 TRMT10CQ7L0Y3 403 aaKnown RBP14.42□□□□□ -0.1
DFFB-209ENST00000477548 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
DFFB-209ENST00000477548 GRAMD1AQ96CP6 724 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 EPAS1Q99814 870 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 CDC42EP4Q9H3Q1 356 aaKnown RBP14.42□□□□□ -0.1
DFFB-209ENST00000477548 SCOCQ9UIL1 159 aa14.42□□□□□ -0.1
DFFB-209ENST00000477548 COL1A1P02452 1464 aaPredicted RBP14.41□□□□□ -0.1
DFFB-209ENST00000477548 NCANO14594 1321 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 PAX3P23760 479 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 KLRK1P26718 216 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 MPP2Q14168 576 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 TBC1D9BQ66K14 1250 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 ZNF449Q6P9G9 518 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 ARHGEF18Q6ZSZ5 1173 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 FRMD5Q7Z6J6 570 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 GPBP1Q86WP2 473 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 SUPT20HQ8NEM7 779 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 TTC8Q8TAM2 541 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 KIFAP3Q92845 792 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 MAGEB18Q96M61 343 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 LRRC37BQ96QE4 947 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 TMEM47Q9BQJ4 181 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 MAF1Q9H063 256 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 TMEM110-MUSTN1A8MSY1 372 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 ANKRD63C9JTQ0 380 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 E9PMD0 336 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 HSPA6P17066 643 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 RANBP1P43487 201 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 ACVR2BQ13705 512 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 CCDC6Q16204 474 aa14.41□□□□□ -0.1
DFFB-209ENST00000477548 TBC1D25Q3MII6 688 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms