RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ARHGAP28Q9P2N2 729 aa14.47□□□□□ -0.09
TOP3A-205ENST00000477508 LRFN2Q9ULH4 789 aa14.47□□□□□ -0.09
TOP3A-205ENST00000477508 INSL6Q9Y581 213 aa14.47□□□□□ -0.09
TOP3A-205ENST00000477508 PCDHB7Q9Y5E2 793 aa14.47□□□□□ -0.09
TOP3A-205ENST00000477508 LAMA3Q16787 3333 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 A0A0U1RQF3 1178 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 TLL1O43897 1013 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 MGEA5O60502 916 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 TSPAN1O60635 241 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 EOMESO95936 686 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 PRKCBP05771 671 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 MYL1P05976 194 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 MAPTP10636 758 aaKnown RBP14.46□□□□□ -0.09
TOP3A-205ENST00000477508 PRPF4BQ13523 1007 aaKnown RBP14.46□□□□□ -0.09
TOP3A-205ENST00000477508 KANK3Q6NY19 840 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 DYMQ7RTS9 669 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 APBB1IPQ7Z5R6 666 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-205ENST00000477508 FAM178BQ8IXR5 827 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 CCDC65Q8IXS2 484 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 TMEM87AQ8NBN3 555 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 CNNM3Q8NE01 707 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 LINC01599Q8WXQ3 324 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 DNAJC19Q96DA6 116 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 C7orf25Q9BPX7 421 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 CCDC113Q9H0I3 377 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 ZHX3Q9H4I2 956 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 TMEM161AQ9NX61 479 aa14.46□□□□□ -0.09
TOP3A-205ENST00000477508 LAMA2P24043 3122 aaKnown RBP14.46□□□□□ -0.1
TOP3A-205ENST00000477508 TMEM265A0A087WTH1 108 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 A0A1B0GUA9 196 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 HOXA2O43364 376 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 TRAK2O60296 914 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 ZNF623O75123 536 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 HOXA11P31270 313 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-205ENST00000477508 NDUFA8P51970 172 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 NCKAP1LP55160 1127 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 HTRA4P83105 476 aaPredicted RBP14.45□□□□□ -0.1
TOP3A-205ENST00000477508 STRN3Q13033 797 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 AMHR2Q16671 573 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 TMEM132AQ24JP5 1023 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 CLEC17AQ6ZS10 378 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 HACE1Q8IYU2 909 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 TMEM161BQ8NDZ6 487 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 PGBD4Q96DM1 585 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 YME1L1Q96TA2 773 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 TRIM9Q9C026 710 aa14.45□□□□□ -0.1
TOP3A-205ENST00000477508 ADGRA3Q8IWK6 1321 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 CNTNAP2Q9UHC6 1331 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 FRMD3A2A2Y4 597 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 GRXCR1A8MXD5 290 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 N4BP3O15049 544 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 SLC16A4O15374 487 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 ACTN4O43707 911 aaKnown RBP14.44□□□□□ -0.1
TOP3A-205ENST00000477508 UPP2O95045 317 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 IDEP14735 1019 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 ARF4P18085 180 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-205ENST00000477508 DNAJB2P25686 324 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 ALCAMQ13740 583 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 LONRF3Q496Y0 759 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 FAM109BQ6ICB4 259 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-205ENST00000477508 HAUS6Q7Z4H7 955 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 ECHDC2Q86YB7 292 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 CRIPAKQ8N1N5 446 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 ADPGKQ9BRR6 497 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 KIFC3Q9BVG8 833 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 MRPL4Q9BYD3 311 aaKnown RBP14.44□□□□□ -0.1
TOP3A-205ENST00000477508 PBX4Q9BYU1 374 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 TRIM6Q9C030 488 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-205ENST00000477508 ST6GALNAC4Q9H4F1 302 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 OLFML3Q9NRN5 406 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 FAM105AQ9NUU6 356 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 PANK4Q9NVE7 773 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 SERTAD1Q9UHV2 236 aa14.44□□□□□ -0.1
TOP3A-205ENST00000477508 PVALEFA0A1B0GWK0 134 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 DGKIO75912 1065 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 ZNF202O95125 648 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 FAM160A1Q05DH4 1040 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 HERC4Q5GLZ8 1057 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-205ENST00000477508 FAM117BQ6P1L5 589 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 SLC27A1Q6PCB7 646 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 ZPBP2Q6X784 338 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 STXBP4Q6ZWJ1 553 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 SPOCK2Q92563 424 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 TIFAQ96CG3 184 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 HVCN1Q96D96 273 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 PAGE5Q96GU1 130 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 GBP4Q96PP9 640 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 UBN1Q9NPG3 1134 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 HOOK1Q9UJC3 728 aaKnown RBP14.43□□□□□ -0.1
TOP3A-205ENST00000477508 PCDHB2Q9Y5E7 798 aa14.43□□□□□ -0.1
TOP3A-205ENST00000477508 K7ENM7 598 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 B4GALT5O43286 388 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 LIG1P18858 919 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 AFMP43652 599 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 RABGGTBP53611 331 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 UBE2HP62256 183 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 ASIC1P78348 528 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 GTF2BQ00403 316 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 DCAF4L1Q3SXM0 396 aa14.42□□□□□ -0.1
TOP3A-205ENST00000477508 ATF7IP2Q5U623 682 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms