RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CDC42EP1Q00587 391 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 KRT32Q14532 448 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 XKR3Q5GH77 459 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 SPATA31D4Q6ZUB0 917 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 GET4Q7L5D6 327 aaPredicted RBP7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 ZNF410Q86VK4 478 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 PALB2Q86YC2 1186 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 CRYGNQ8WXF5 182 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 SMG7Q92540 1137 aaKnown RBP7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 STAMQ92783 540 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 SLC5A5Q92911 643 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 BRF1Q92994 677 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 LENG9Q96B70 501 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 RIT2Q99578 217 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 APOL6Q9BWW8 343 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 VN1R3Q9BXE9 311 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 TBC1D17Q9HA65 648 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 FAM217BQ9NTX9 383 aaPredicted RBP7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 IGSF9Q9P2J2 1179 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 CLUHO75153 1309 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 NRP1O14786 923 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 PRPF3O43395 683 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 MARCH6O60337 910 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 B4GALT3O60512 393 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 RFPL2O75678 378 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 DDHD2O94830 711 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 TDP2O95551 362 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 LMNAP02545 664 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 DCNP07585 359 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 HMGB1P09429 215 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 ITGA4P13612 1032 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 CIITAP33076 1130 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 GLUD2P49448 558 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 CCT2P78371 535 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 TARBP2Q15633 366 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 ZC3H14Q6PJT7 736 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 BLOC1S2Q6QNY1 142 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 AGMOQ6ZNB7 445 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 C15orf39Q6ZRI6 1047 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 DGLUCYQ7Z3D6 616 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 RASEFQ8IZ41 740 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 GPR152Q8TDT2 470 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 TBCKQ8TEA7 893 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 SLC7A3Q8WY07 619 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 RSPH1Q8WYR4 309 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 JAKMIP1Q96N16 626 aaKnown RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 JPH2Q9BR39 696 aaPredicted RBP7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 AGPAT5Q9NUQ2 364 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 STK39Q9UEW8 545 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 DPP7Q9UHL4 492 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 SSX2IPQ9Y2D8 614 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 COL4A3BPQ9Y5P4 624 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 CNTNAP2Q9UHC6 1331 aa7.48□□□□□ -1.21
RTFDC1-206ENST00000477485 COL4A3Q01955 1670 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 DMDP11532 3685 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 KRBA1A5PL33 1030 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 TEX28O15482 410 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 MAFO75444 373 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 NR1I2O75469 434 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 SOD2P04179 222 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 SRFP11831 508 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 MLH1P40692 756 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 USP11P51784 963 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 RCAN1P53805 252 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 NPEPPSP55786 919 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 PSMC5P62195 406 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 SKAP1Q86WV1 359 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 RDM1Q8NG50 284 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 PSPC1Q8WXF1 523 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 TMEM143Q96AN5 459 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 CPB2Q96IY4 423 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 CEP170P1Q96L14 293 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 B3GALT6Q96L58 329 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 MYADMQ96S97 322 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 TMEM175Q9BSA9 504 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 HERC2P3Q9BVR0 1158 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 RNF26Q9BY78 433 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 TRIM6Q9C030 488 aaPredicted RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 ARHGEF3Q9NR81 526 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 KANSL3Q9P2N6 904 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 POLIQ9UNA4 740 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 SIT1Q9Y3P8 196 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 GVINP1Q7Z2Y8 2422 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 VPS13AQ96RL7 3174 aa7.47□□□□□ -1.21
RTFDC1-206ENST00000477485 TRIP11Q15643 1979 aa7.46□□□□□ -1.21
RTFDC1-206ENST00000477485 RALGAPA1Q6GYQ0 2036 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 MED19A0JLT2 244 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 F8W810 466 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 CPLX1O14810 134 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 DKC1O60832 514 aaKnown RBP eCLIP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 N4BP1O75113 896 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 ZNF623O75123 536 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 PSMD10O75832 226 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 RPL17P18621 184 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms