RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CCDC6Q16204 474 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 SNRNP35Q16560 246 aaKnown RBP11.84□□□□□ -0.51
COL27A1-204ENST00000477421 CBWD2Q8IUF1 395 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 RNF169Q8NCN4 708 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 FBXL13Q8NEE6 735 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 BTBD6Q96KE9 485 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 POLR3FQ9H1D9 316 aaPredicted RBP11.84□□□□□ -0.51
COL27A1-204ENST00000477421 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 ANAPC5Q9UJX4 755 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
COL27A1-204ENST00000477421 ATP5DP30049 168 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 CUL1Q13616 776 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 SETDB1Q15047 1291 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 SUPT20HL1Q3ZLR7 823 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 PI4K2BG5E9Z4 385 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 H0YCG3 227 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 MEIS2O14770 477 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 KRT1P04264 644 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 GLI1P08151 1106 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 CLTAP09496 248 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 SEC24CP53992 1094 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 FIGNQ5HY92 759 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 DNAJC24Q6P3W2 148 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 MCPH1Q8NEM0 835 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 ZWILCHQ9H900 591 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 ATP6V0A4Q9HBG4 840 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 GOLGA8MH3BSY2 632 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 RNF8O76064 485 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 CAP2P40123 477 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 ZRSR2Q15696 482 aaKnown RBP11.83□□□□□ -0.52
COL27A1-204ENST00000477421 STXBP2Q15833 593 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 CDO1Q16878 200 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 CCDC137Q6PK04 289 aaKnown RBP11.83□□□□□ -0.52
COL27A1-204ENST00000477421 ARL8AQ96BM9 186 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 DNAJC19Q96DA6 116 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 TLR10Q9BXR5 811 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 TXNDC16Q9P2K2 825 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 ALG6Q9Y672 507 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 LMO7Q8WWI1 1683 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 ZRANB2O95218 330 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL27A1-204ENST00000477421 FGFR4P22455 802 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 CNGA1P29973 690 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 DGKZQ13574 1117 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 LRRC14Q15048 493 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 PALM2Q8IXS6 379 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
COL27A1-204ENST00000477421 ACP6Q9NPH0 428 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 SLITRK3O94933 977 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 PBX1P40424 430 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 CLUL1Q15846 466 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
COL27A1-204ENST00000477421 FAM160B1Q5W0V3 765 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 LRRC55Q6ZSA7 311 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 MAIP1Q8WWC4 291 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 TACO1Q9BSH4 297 aaKnown RBP11.83□□□□□ -0.52
COL27A1-204ENST00000477421 KCNG1Q9UIX4 513 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 SIK3Q9Y2K2 1263 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 FAM169AQ9Y6X4 670 aa11.83□□□□□ -0.52
COL27A1-204ENST00000477421 CXCL9Q07325 125 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 TMEM119Q4V9L6 283 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 HNRNPLLQ8WVV9 542 aaKnown RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 FERMT1Q9BQL6 677 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 SLC24A3Q9HC58 644 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 JPH1Q9HDC5 661 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 MYOZ2Q9NPC6 264 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 PCSK1NQ9UHG2 260 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 ODF2LQ9ULJ1 636 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 TMX2Q9Y320 296 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 WDR91A4D1P6 747 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 ITGA4P13612 1032 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 ALCAMQ13740 583 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 FAM84AQ96KN4 292 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 POLR3CQ9BUI4 534 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 DNAI2Q9GZS0 605 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 FAM49AQ9H0Q0 323 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 TOPORSQ9NS56 1045 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 RBAKQ9NYW8 714 aaPredicted RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 AGO2Q9UKV8 859 aaKnown RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 H7C0C1 242 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 RGL2O15211 777 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 SCP2P22307 547 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 ATP5OP48047 213 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 HDLBPQ00341 1268 aaKnown RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 TMED2Q15363 201 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 FAM133BQ5BKY9 247 aaKnown RBP11.82□□□□□ -0.52
COL27A1-204ENST00000477421 SLC20A1Q8WUM9 679 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 GMCL1Q96IK5 515 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 EHD4Q9H223 541 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 SLC9A2Q9UBY0 812 aa11.82□□□□□ -0.52
COL27A1-204ENST00000477421 PIK3R2O00459 728 aa11.81□□□□□ -0.52
COL27A1-204ENST00000477421 MYBL2P10244 700 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms