RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 UBXN11Q5T124 520 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 EEF1DP3Q658K8 133 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 FAM117BQ6P1L5 589 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 ZNF720Q7Z2F6 126 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 ZBTB8OSQ8IWT0 167 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 C17orf75Q9HAS0 396 aa17.49■□□□□ 0.39
COPS3-207ENST00000477299 PIN4Q9Y237 131 aaKnown RBP17.49■□□□□ 0.39
COPS3-207ENST00000477299 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 ABHD14A-ACY1A0A1B0GW23 586 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 TISP43B9A030 160 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 MCM4P33991 863 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 POSTNQ15063 836 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 CAMK4Q16566 473 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 UNC13DQ70J99 1090 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 FAM178BQ8IXR5 827 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 CCDC65Q8IXS2 484 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 APBB2Q92870 758 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 ZBTB45Q96K62 511 aaPredicted RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 RNPC3Q96LT9 517 aaKnown RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 TIGD1Q96MW7 591 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 TARS2Q9BW92 718 aaKnown RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 STRA6Q9BX79 667 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 LRRC27Q9C0I9 530 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 C2orf40Q9H1Z8 148 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 TSPYL2Q9H2G4 693 aaPredicted RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 TMEM134Q9H6X4 195 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 MRPL44Q9H9J2 332 aaKnown RBP17.48■□□□□ 0.39
COPS3-207ENST00000477299 AGPAT5Q9NUQ2 364 aa17.48■□□□□ 0.39
COPS3-207ENST00000477299 RANBP2P49792 3224 aaKnown RBP17.47■□□□□ 0.39
COPS3-207ENST00000477299 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 C9IYK1 514 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 ACKR2O00590 384 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
COPS3-207ENST00000477299 UPP2O95045 317 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 RPN1P04843 607 aaKnown RBP17.47■□□□□ 0.39
COPS3-207ENST00000477299 ACTN1P12814 892 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 GAP43P17677 238 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 HOXD13P35453 343 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 GATMP50440 423 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 SMTNP53814 917 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 MAPK6Q16659 721 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 FAM187BQ17R55 369 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 SLC39A2Q9NP94 309 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 RGS18Q9NS28 235 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 PRMT7Q9NVM4 692 aaPredicted RBP17.47■□□□□ 0.39
COPS3-207ENST00000477299 TBX20Q9UMR3 447 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 TRIOBPQ9H2D6 2365 aa17.47■□□□□ 0.39
COPS3-207ENST00000477299 A0A1B0GUA9 196 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 ANKRD63C9JTQ0 380 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 KINO60870 393 aaKnown RBP17.46■□□□□ 0.39
COPS3-207ENST00000477299 PPP1R37O75864 691 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 ERLIN2O94905 339 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 EFNA5P52803 228 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 RABGGTBP53611 331 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 GTF2BQ00403 316 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 STK4Q13043 487 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 PRPF4BQ13523 1007 aaKnown RBP17.46■□□□□ 0.39
COPS3-207ENST00000477299 ISM2Q6H9L7 571 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 SLC39A4Q6P5W5 647 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 TDHQ8IZJ6 230 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 CRIPAKQ8N1N5 446 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 LPPQ93052 612 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 ACO2Q99798 780 aaKnown RBP17.46■□□□□ 0.39
COPS3-207ENST00000477299 HAPLN2Q9GZV7 340 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 PCDHA5Q9Y5H7 936 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 SLC4A7Q9Y6M7 1214 aa17.46■□□□□ 0.39
COPS3-207ENST00000477299 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.38
COPS3-207ENST00000477299 CNTNAP2Q9UHC6 1331 aa17.46■□□□□ 0.38
COPS3-207ENST00000477299 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 PVALEFA0A1B0GWK0 134 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 ABLIM1O14639 778 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 GCNT3O95395 438 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 MYOGP15173 224 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 ZSCAN20P17040 1043 aaPredicted RBP17.45■□□□□ 0.38
COPS3-207ENST00000477299 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
COPS3-207ENST00000477299 FAM189BP81408 668 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 TWF2Q6IBS0 349 aaKnown RBP17.45■□□□□ 0.38
COPS3-207ENST00000477299 KANK3Q6NY19 840 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 KIAA0895Q8NCT3 520 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 SMG8Q8ND04 991 aaKnown RBP17.45■□□□□ 0.38
COPS3-207ENST00000477299 FTHL17Q9BXU8 183 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 CXCL16Q9H2A7 254 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 CHST12Q9NRB3 414 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 OLFML3Q9NRN5 406 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 RNF19AQ9NV58 838 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 GDAQ9Y2T3 454 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 HES2Q9Y543 173 aa17.45■□□□□ 0.38
COPS3-207ENST00000477299 NPTXRO95502 500 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 KCNJ6P48051 423 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 ATF7IP2Q5U623 682 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 EPM2AIP1Q7L775 607 aaPredicted RBP17.44■□□□□ 0.38
COPS3-207ENST00000477299 ZBTB33Q86T24 672 aa17.44■□□□□ 0.38
COPS3-207ENST00000477299 ECHDC2Q86YB7 292 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms