RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.03□□□□□ -1.286e-8■■■■□ 25.4
CDKN1B-204ENST00000477087 CDIP1Q9H305 208 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 BICC1Q9H694 974 aaKnown RBP7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 MSRB2Q9Y3D2 182 aa7.03□□□□□ -1.28
CDKN1B-204ENST00000477087 MROH6A6NGR9 719 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 PDE8AO60658 829 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 LRG1P02750 347 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 CYP1A1P04798 512 aaPredicted RBP7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 GTF2F1P35269 517 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 RASGRF1Q13972 1273 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 HLFQ16534 295 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 EPHA10Q5JZY3 1008 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 PRR31Q5SQ13 230 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 TTC22Q5TAA0 569 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 SPATC1Q76KD6 591 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 LGI4Q8N135 537 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 TXNDC5Q8NBS9 432 aaKnown RBP7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 KCNJ15Q99712 375 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 ALG1Q9BT22 464 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 CCDC113Q9H0I3 377 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 L2HGDHQ9H9P8 463 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 CROTQ9UKG9 612 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 DUSP10Q9Y6W6 482 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 RTL9Q8NET4 1388 aa7.02□□□□□ -1.29
CDKN1B-204ENST00000477087 SH3TC1Q8TE82 1336 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 TOGARAM1Q9Y4F4 1720 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 FAM47E-STBD1D6RA91 191 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 K7ESM1 405 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 EYA2O00167 538 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 ERC2O15083 957 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 IGSF3O75054 1194 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 GLRX3O76003 335 aaKnown RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 SOD2P04179 222 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 PIP4K2AP48426 406 aaPredicted RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 GRIN1Q05586 938 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 SSRP1Q08945 709 aaKnown RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 SF3B3Q15393 1217 aaKnown RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 SPATS1Q496A3 300 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 LMBR1LQ6UX01 489 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 TMC5Q6UXY8 1006 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 UBE3BQ7Z3V4 1068 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 LCORQ96JN0 433 aaPredicted RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 UTP14AQ9BVJ6 771 aaKnown RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 CCNL1Q9UK58 526 aaPredicted RBP7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 EXOC6BQ9Y2D4 811 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 WNK3Q9BYP7 1800 aa7.01□□□□□ -1.29
CDKN1B-204ENST00000477087 N4BP2Q86UW6 1770 aaPredicted RBP7□□□□□ -1.29
CDKN1B-204ENST00000477087 COL6A2P12110 1019 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 ZNF28P17035 718 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 MX1P20591 662 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 CCDC57Q2TAC2 916 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 VASNQ6EMK4 673 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 SCUBE1Q8IWY4 988 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 C16orf71Q8IYS4 520 aaPredicted RBP7□□□□□ -1.29
CDKN1B-204ENST00000477087 UHMK1Q8TAS1 419 aaKnown RBP7□□□□□ -1.29
CDKN1B-204ENST00000477087 IL17RAQ96F46 866 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 NYXQ9GZU5 481 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 ECHDC1Q9NTX5 307 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 RGS17Q9UGC6 210 aaPredicted RBP7□□□□□ -1.29
CDKN1B-204ENST00000477087 TRMT112Q9UI30 125 aaKnown RBP7□□□□□ -1.29
CDKN1B-204ENST00000477087 CNOT11Q9UKZ1 510 aaKnown RBP7□□□□□ -1.29
CDKN1B-204ENST00000477087 LAMB4A4D0S4 1761 aa7□□□□□ -1.29
CDKN1B-204ENST00000477087 TRBV23-1A0A0A0MS06 115 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 AQP7O14520 342 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 CDC45O75419 566 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 ATP5JP18859 108 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 SDSP20132 328 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 SUMO1P63165 101 aaKnown RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 IFIT5Q13325 482 aaKnown RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 TUSC3Q13454 348 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 SUSD4Q5VX71 490 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 PTF1AQ7RTS3 328 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 MAMDC2Q7Z304 686 aaPredicted RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 ATG9AQ7Z3C6 839 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 MTDHQ86UE4 582 aaKnown RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 EAF2Q96CJ1 260 aaPredicted RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 TMEM168Q9H0V1 697 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 IPPKQ9H8X2 491 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 UPF2Q9HAU5 1272 aaKnown RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 FTSJ1Q9UET6 329 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 RIPOR2Q9Y4F9 1068 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 ITGB4P16144 1822 aa6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 VIRMAQ69YN4 1812 aaKnown RBP6.99□□□□□ -1.29
CDKN1B-204ENST00000477087 C5P01031 1676 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 RREB1Q92766 1687 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 ANKRD18BA2A2Z9 1011 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 KLRG2A4D1S0 409 aaPredicted RBP6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 HIP1O00291 1037 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 NTSR2O95665 410 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 ADRB1P08588 477 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 IFIT2P09913 472 aaKnown RBP6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 GSPT1P15170 499 aaKnown RBP6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 TXNRD1Q16881 649 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 ZNF827Q17R98 1081 aa6.98□□□□□ -1.29
CDKN1B-204ENST00000477087 PAN2Q504Q3 1202 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms