RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 SSH2Q76I76 1423 aa6.73□□□□□ -1.33
SSR3-206ENST00000476217 SHPRHQ149N8 1683 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 MPIG6BO95866 241 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 ATP2A2P16615 1042 aaKnown RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 HOXA5P20719 270 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 CD40P25942 277 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 MC4RP32245 332 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 STAT3P40763 770 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 LSSP48449 732 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 IL13RA1P78552 427 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 LRRC32Q14392 662 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 TTC38Q5R3I4 469 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 FSTL4Q6MZW2 842 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 DDX46Q7L014 1031 aaKnown RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 RTN4RL1Q86UN2 441 aaPredicted RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 PHYKPLQ8IUZ5 450 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 SMC1BQ8NDV3 1235 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 CHAC2Q8WUX2 184 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 MAML3Q96JK9 1138 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 AMNQ9BXJ7 453 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 CNOT11Q9UKZ1 510 aaKnown RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 TRPM3Q9HCF6 1732 aaPredicted RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 MARF1Q9Y4F3 1742 aaKnown RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 NPHP3Q7Z494 1330 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 CDK12Q9NYV4 1490 aaPredicted RBP6.72□□□□□ -1.33
SSR3-206ENST00000476217 LTBP4Q8N2S1 1624 aa6.72□□□□□ -1.33
SSR3-206ENST00000476217 MAP2P11137 1827 aaKnown RBP6.71□□□□□ -1.33
SSR3-206ENST00000476217 AATKQ6ZMQ8 1374 aa6.71□□□□□ -1.33
SSR3-206ENST00000476217 SMG6Q86US8 1419 aaKnown RBP6.71□□□□□ -1.34
SSR3-206ENST00000476217 ZEB2O60315 1214 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 PRLP01236 227 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 ETV4P43268 484 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 CTSWP56202 376 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 PHC1P78364 1004 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 TOP3AQ13472 1001 aaPredicted RBP6.71□□□□□ -1.34
SSR3-206ENST00000476217 USP10Q14694 798 aaKnown RBP6.71□□□□□ -1.34
SSR3-206ENST00000476217 NFIXQ14938 502 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 PCBP1Q15365 356 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSR3-206ENST00000476217 ZMAT1Q5H9K5 638 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 UBXN11Q5T124 520 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 TIGD7Q6NT04 549 aaPredicted RBP6.71□□□□□ -1.34
SSR3-206ENST00000476217 KRT28Q7Z3Y7 464 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 RALYLQ86SE5 291 aaKnown RBP6.71□□□□□ -1.34
SSR3-206ENST00000476217 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 USP7Q93009 1102 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 FOXRED1Q96CU9 486 aaPredicted RBP6.71□□□□□ -1.34
SSR3-206ENST00000476217 MSL2Q9HCI7 577 aa6.71□□□□□ -1.34
SSR3-206ENST00000476217 BLMP54132 1417 aaPredicted RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 A0A0G2JNJ9 132 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 DVL2O14641 736 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 SLC9A1P19634 815 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 MASP1P48740 699 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 BCAR1P56945 870 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 IL2P60568 153 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 EIF4HQ15056 248 aaKnown RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 KANK2Q63ZY3 851 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 TMEM200BQ69YZ2 307 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 GRAMD4Q6IC98 578 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 BRINP3Q76B58 766 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 RNF180Q86T96 592 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 ZDHHC14Q8IZN3 488 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 NXPE1Q8N323 547 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 C7orf31Q8N865 590 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 NUDT10Q8NFP7 164 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 CXorf38Q8TB03 319 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 RPGRQ92834 1020 aaKnown RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 NUDT11Q96G61 164 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 ELF4Q99607 663 aaPredicted RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 ZDHHC5Q9C0B5 715 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 TOMM22Q9NS69 142 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 THG1LQ9NWX6 298 aaKnown RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 Q9UFV3 132 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 NUDCQ9Y266 331 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 COL3A1P02461 1466 aaPredicted RBP6.7□□□□□ -1.34
SSR3-206ENST00000476217 ALS2Q96Q42 1657 aa6.7□□□□□ -1.34
SSR3-206ENST00000476217 TNS3Q68CZ2 1445 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 PXDNQ92626 1479 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 ZNF891A8MT65 544 aaPredicted RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 BRINP1O60477 761 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 CANXP27824 592 aaKnown RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 LSP1P33241 339 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 SESN2P58004 480 aaPredicted RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 RRS1Q15050 365 aaKnown RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 CT47A1Q5JQC4 288 aaPredicted RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 PHF19Q5T6S3 580 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 KRT26Q7Z3Y9 468 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 KBTBD2Q8IY47 623 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 CHTF18Q8WVB6 975 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 LEO1Q8WVC0 666 aaPredicted RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 DDX17Q92841 729 aaKnown RBP6.69□□□□□ -1.34
SSR3-206ENST00000476217 TTC1Q99614 292 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 IFT22Q9H7X7 185 aa6.69□□□□□ -1.34
SSR3-206ENST00000476217 POLKQ9UBT6 870 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms