RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 EPB41L2O43491 1005 aaKnown RBP5.04□□□□□ -1.6
VPS13D-207ENST00000476169 TIMM44O43615 452 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 POU2F2P09086 479 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 FAM163BP0C2L3 166 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 THBS2P35442 1172 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 CCT2P78371 535 aaKnown RBP5.04□□□□□ -1.6
VPS13D-207ENST00000476169 PFKPQ01813 784 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 NOLC1Q14978 699 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS13D-207ENST00000476169 CR1LQ2VPA4 569 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 FYB2Q5VWT5 728 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 TMC5Q6UXY8 1006 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 CD300LDQ6UXZ3 194 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 LIPIQ6XZB0 460 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 LDHAL6AQ6ZMR3 332 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 TMC6Q7Z403 805 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 PROSER1Q86XN7 944 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 LYSMD2Q8IV50 215 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 DENND1CQ8IV53 801 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 NKAPQ8N5F7 415 aaKnown RBP5.04□□□□□ -1.6
VPS13D-207ENST00000476169 OR14C36Q8NHC7 312 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 IGDCC4Q8TDY8 1250 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 TSPEARQ8WU66 669 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 MVB12AQ96EY5 273 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 RIPOR3Q96MK2 946 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 EIF2AK1Q9BQI3 630 aaKnown RBP5.04□□□□□ -1.6
VPS13D-207ENST00000476169 MTG2Q9H4K7 406 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 RSAD1Q9HA92 442 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 PRSS50Q9UI38 385 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 SERPINB13Q9UIV8 391 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 DENND2AQ9ULE3 1009 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 POLHQ9Y253 713 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 CDY2AQ9Y6F7 541 aa5.04□□□□□ -1.6
VPS13D-207ENST00000476169 RASA4BC9J798 803 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 EXOC5O00471 708 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 RASA4O43374 803 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 MGEA5O60502 916 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 APEX1P27695 318 aaKnown RBP5.03□□□□□ -1.6
VPS13D-207ENST00000476169 PEX2P28328 305 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 TM4SF4P48230 202 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 YBX1P67809 324 aaKnown RBP5.03□□□□□ -1.6
VPS13D-207ENST00000476169 ZNF200P98182 395 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-207ENST00000476169 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 KCTD2Q14681 263 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 RNF220Q5VTB9 566 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 OLFML2BQ68BL8 750 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 SLC41A1Q8IVJ1 513 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 FAM26EQ8N5C1 309 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 MYCT1Q8N699 235 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 CCDC89Q8N998 374 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 DEPTORQ8TB45 409 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 COA7Q96BR5 231 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 B3GNT5Q9BYG0 378 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 CERS4Q9HA82 394 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 SAGE1Q9NXZ1 904 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 FTSJ1Q9UET6 329 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 CDC23Q9UJX2 597 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 PCDHB6Q9Y5E3 794 aa5.03□□□□□ -1.6
VPS13D-207ENST00000476169 GOLIM4O00461 696 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 OPHN1O60890 802 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 RNASEH2AO75792 299 aaKnown RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 TUSC2O75896 110 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 UBXN7O94888 489 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 HRGP04196 525 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 CELA3BP08861 270 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 PDCP20941 246 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 TNFAIP3P21580 790 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 GRK6P43250 576 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 FXR1P51114 621 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 CACNB3P54284 484 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 TNFAIP2Q03169 654 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 NFATC3Q12968 1075 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 DDX10Q13206 875 aaKnown RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 CNGB1Q14028 1251 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 SKIDA1Q1XH10 827 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 ANO4Q32M45 955 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 TUBB8Q3ZCM7 444 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 USP45Q70EL2 814 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 RSRC2Q7L4I2 434 aaKnown RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 IRF2BP1Q8IU81 584 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 ABI1Q8IZP0 508 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 OR2C3Q8N628 320 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 CDYL2Q8N8U2 506 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 C1orf131Q8NDD1 294 aaKnown RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 GAB3Q8WWW8 586 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 FATE1Q969F0 183 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 C1GALT1C1Q96EU7 318 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 CDK5RAP3Q96JB5 506 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 NOL10Q9BSC4 688 aaKnown RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 BTBD2Q9BX70 525 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 WDR12Q9GZL7 423 aaKnown RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 PITHD1Q9GZP4 211 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-207ENST00000476169 MYLK2Q9H1R3 596 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 OR10A5Q9H207 317 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 TMEM60Q9H2L4 133 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 BHMT2Q9H2M3 363 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 RRN3Q9NYV6 651 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 HDAC9Q9UKV0 1011 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 PLA2G2DQ9UNK4 145 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 CORO2BQ9UQ03 480 aa5.02□□□□□ -1.61
VPS13D-207ENST00000476169 RABGAP1Q9Y3P9 1069 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms