RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 CASD1Q96PB1 797 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 POLR3FQ9H1D9 316 aaPredicted RBP12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 CWH43Q9H720 699 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 TLR9Q9NR96 1032 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 RNF19AQ9NV58 838 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 CLDND1Q9NY35 253 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 HCSTQ9UBK5 93 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
NUDCD3-206ENST00000475952 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 DNAJB1P25685 340 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 AXLP30530 894 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 ARL2P36404 184 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 TOB1P50616 345 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 PTPN5P54829 565 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 PTENP60484 403 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 POU5F1BQ06416 359 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 CAPSQ13938 189 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 IER5LQ5T953 404 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 GLB1LQ6UWU2 654 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 NFKBIZQ9BYH8 718 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 MINDY3Q9H8M7 445 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 FAM186AA6NE01 2351 aa12.64□□□□□ -0.39
NUDCD3-206ENST00000475952 CNTNAP2Q9UHC6 1331 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 FSD2A1L4K1 749 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 ZNF623O75123 536 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 GLRA2P23416 452 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 PRPHP41219 470 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 MBTD1Q05BQ5 628 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 TCF15Q12870 199 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 CAMK1Q14012 370 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 PDIA5Q14554 519 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 CTC1Q2NKJ3 1217 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 NOTUMQ6P988 496 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 DTHD1Q6ZMT9 781 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 LRRC55Q6ZSA7 311 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 RNF135Q8IUD6 432 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 C4orf32Q8N8J7 132 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 IGSF22Q8N9C0 903 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 CNNM3Q8NE01 707 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 URGCPQ8TCY9 931 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 ASAP3Q8TDY4 903 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 LPPQ93052 612 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 POP1Q99575 1024 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 PUF60Q9UHX1 559 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 LZTS1Q9Y250 596 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 PCDHB2Q9Y5E7 798 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 ZNF292O60281 2723 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 FRYLO94915 3013 aa12.63□□□□□ -0.39
NUDCD3-206ENST00000475952 DNAH14Q0VDD8 3507 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 C2orf16Q68DN1 1984 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 A0A087WWV3 80 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 LRRIQ4A6NIV6 560 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 MBTPS2O43462 519 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 TSPAN1O60635 241 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 ALDH7A1P49419 539 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 KRT17Q04695 432 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 RNASELQ05823 741 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 HYAL1Q12794 435 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 CLUL1Q15846 466 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 KRT79Q5XKE5 535 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 MAEAQ7L5Y9 396 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 BMP8AQ7Z5Y6 402 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 ZBTB8OSQ8IWT0 167 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 MICAL1Q8TDZ2 1067 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 MRPS27Q92552 414 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 EDAQ92838 391 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 BACH2Q9BYV9 841 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 TRIM6Q9C030 488 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 IGFLR1Q9H665 355 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 GPRC5CQ9NQ84 441 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 ENTPD7Q9NQZ7 604 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 KIAA1024Q9UPX6 916 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 INPP5FQ9Y2H2 1132 aa12.62□□□□□ -0.39
NUDCD3-206ENST00000475952 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 HOXA11P31270 313 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 PBX3P40426 434 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 NDUFV1P49821 464 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 ATP2C1P98194 919 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 PPP2R5AQ15172 486 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 MRPL10Q7Z7H8 261 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-206ENST00000475952 ADGRD2Q7Z7M1 963 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms