RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 GPC3P51654 580 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 DRP2Q13474 957 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 TARBP2Q15633 366 aaKnown RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 LLGL2Q6P1M3 1020 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 Q6ZUG5 572 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 SMAP1Q8IYB5 467 aaPredicted RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 SLC39A11Q8N1S5 342 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 MRPL43Q8N983 215 aaKnown RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 C6orf50Q9HD87 102 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 AKT3Q9Y243 479 aa11.79□□□□□ -0.52
CALD1-217ENST00000475772 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
CALD1-217ENST00000475772 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 C2orf71A6NGG8 1288 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 NT5C1B-RDH14C9J2C7 533 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 DARSP14868 501 aaKnown RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 SP100P23497 879 aaPredicted RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 METAP2P50579 478 aaKnown RBP eCLIP11.78□□□□□ -0.52
CALD1-217ENST00000475772 SETQ01105 290 aaPredicted RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 LAPTM4AQ15012 233 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 PTPN21Q16825 1174 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 KANK3Q6NY19 840 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 TMC7Q7Z402 723 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 FOXJ1Q92949 421 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 BRF1Q92994 677 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 PHKBQ93100 1093 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 AGXT2Q9BYV1 514 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 DISC1Q9NRI5 854 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 TOR4AQ9NXH8 423 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
CALD1-217ENST00000475772 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 HCFC2Q9Y5Z7 792 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 NID2Q14112 1375 aa11.78□□□□□ -0.52
CALD1-217ENST00000475772 VPS13AQ96RL7 3174 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 SIAH2O43255 324 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.53
CALD1-217ENST00000475772 EOMESO95936 686 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.53
CALD1-217ENST00000475772 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
CALD1-217ENST00000475772 FBXL16Q8N461 479 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 HELQQ8TDG4 1101 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 RIPOR3Q96MK2 946 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 SH2D3AQ9BRG2 576 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 SMOC2Q9H3U7 446 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 POMKQ9H5K3 350 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 ENTPD7Q9NQZ7 604 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 NRBP2Q9NSY0 501 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
CALD1-217ENST00000475772 FAM186AA6NE01 2351 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 FSD2A1L4K1 749 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 MEIS3P2A8K0S8 358 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 WDR64B1ANS9 1081 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 PSMD10O75832 226 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
CALD1-217ENST00000475772 WEE2P0C1S8 567 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 HOXB8P17481 243 aaPredicted RBP11.76□□□□□ -0.53
CALD1-217ENST00000475772 TMOD1P28289 359 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 GNA11P29992 359 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 USP11P51784 963 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 PRKCEQ02156 737 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 KRT17Q04695 432 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 KRT32Q14532 448 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 MCTP2Q6DN12 878 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 LRRC43Q8N309 656 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 C12orf76Q8N812 135 aaPredicted RBP11.76□□□□□ -0.53
CALD1-217ENST00000475772 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 CASP10Q92851 521 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 SLC5A5Q92911 643 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 FAM167AQ96KS9 214 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 PRRX2Q99811 253 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 NIFKQ9BYG3 293 aaKnown RBP11.76□□□□□ -0.53
CALD1-217ENST00000475772 ADAM7Q9H2U9 754 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
CALD1-217ENST00000475772 C2orf16Q68DN1 1984 aa11.76□□□□□ -0.53
CALD1-217ENST00000475772 A0A087WZ62 844 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 M0R2N6 131 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 B4GALT3O60512 393 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 BRD1O95696 1058 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 CXCL14O95715 111 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 VARSP26640 1264 aaKnown RBP11.75□□□□□ -0.53
CALD1-217ENST00000475772 HSPA4P34932 840 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 PPM1AP35813 382 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 PHKA2P46019 1235 aa11.75□□□□□ -0.53
CALD1-217ENST00000475772 BCAR1P56945 870 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms