RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 DENND4AQ7Z401 1863 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 GVINP1Q7Z2Y8 2422 aa22.93■■□□□ 1.26
VPS36-203ENST00000475375 NARSO43776 548 aaKnown RBP22.92■■□□□ 1.26
VPS36-203ENST00000475375 POMCP01189 267 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 CFHP08603 1231 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 MYBP10242 640 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 PSMC5P62195 406 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 CCT2P78371 535 aaKnown RBP22.92■■□□□ 1.26
VPS36-203ENST00000475375 ELMSAN1Q6PJG2 1045 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 ANO5Q75V66 913 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 ERMP1Q7Z2K6 904 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 SKAP1Q86WV1 359 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 TMEM175Q9BSA9 504 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 IFT122Q9HBG6 1241 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 NCOA5Q9HCD5 579 aaKnown RBP22.92■■□□□ 1.26
VPS36-203ENST00000475375 SH3GLB2Q9NR46 395 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 COL4A3BPQ9Y5P4 624 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 DCHS1Q96JQ0 3298 aa22.92■■□□□ 1.26
VPS36-203ENST00000475375 CNTNAP2Q9UHC6 1331 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 NRP1O14786 923 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 CDC45O75419 566 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 ADH1AP07327 375 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 SRGAP2CP0DJJ0 459 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 IFNAR1P17181 557 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 AFF1P51825 1210 aaKnown RBP22.91■■□□□ 1.26
VPS36-203ENST00000475375 NONOQ15233 471 aaKnown RBP eCLIP22.91■■□□□ 1.26
VPS36-203ENST00000475375 NTRK3Q16288 839 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 RSAD2Q8WXG1 361 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 SLC7A3Q8WY07 619 aa22.91■■□□□ 1.26
VPS36-203ENST00000475375 PRG3Q9Y2Y8 225 aaPredicted RBP22.91■■□□□ 1.26
VPS36-203ENST00000475375 CCDC195A0A1B0GUA6 201 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 NPEPPSP55786 919 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 TRIM22Q8IYM9 498 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 STAMQ92783 540 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 SLKQ9H2G2 1235 aaPredicted RBP22.9■■□□□ 1.26
VPS36-203ENST00000475375 DPP7Q9UHL4 492 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 PCDHA4Q9UN74 947 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 SSX2IPQ9Y2D8 614 aa22.9■■□□□ 1.26
VPS36-203ENST00000475375 LILRB3O75022 631 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 GLUD1P00367 558 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 SOD2P04179 222 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 OR1G1P47890 313 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 B3GNT9Q6UX72 402 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 SRGAP1Q7Z6B7 1085 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 MRPL10Q7Z7H8 261 aaKnown RBP22.89■■□□□ 1.25
VPS36-203ENST00000475375 CMASQ8NFW8 434 aaPredicted RBP22.89■■□□□ 1.25
VPS36-203ENST00000475375 ETNPPLQ8TBG4 499 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 PRPF31Q8WWY3 499 aaKnown RBP22.89■■□□□ 1.25
VPS36-203ENST00000475375 TMEM143Q96AN5 459 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 RPS6KC1Q96S38 1066 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 HERC2P3Q9BVR0 1158 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 BMP2KQ9NSY1 1161 aaPredicted RBP22.89■■□□□ 1.25
VPS36-203ENST00000475375 DDX25Q9UHL0 483 aaKnown RBP22.89■■□□□ 1.25
VPS36-203ENST00000475375 CA14Q9ULX7 337 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 SNX14Q9Y5W7 946 aa22.89■■□□□ 1.25
VPS36-203ENST00000475375 CLUHO75153 1309 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 CYP3A7-CYP3A51PA0A087WV96 503 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 INPPL1O15357 1258 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 TEX28O15482 410 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 N4BP1O75113 896 aaKnown RBP22.88■■□□□ 1.25
VPS36-203ENST00000475375 RPS6KB1P23443 525 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 CYP3A7P24462 503 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 PSPC1Q8WXF1 523 aaKnown RBP22.88■■□□□ 1.25
VPS36-203ENST00000475375 CEP170P1Q96L14 293 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 MINDY3Q9H8M7 445 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 WDR6Q9NNW5 1121 aaKnown RBP22.88■■□□□ 1.25
VPS36-203ENST00000475375 WNT16Q9UBV4 365 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 C2orf16Q68DN1 1984 aa22.88■■□□□ 1.25
VPS36-203ENST00000475375 ITGA4P13612 1032 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 HOXA11P31270 313 aaPredicted RBP22.87■■□□□ 1.25
VPS36-203ENST00000475375 QARSP47897 775 aaKnown RBP22.87■■□□□ 1.25
VPS36-203ENST00000475375 GLUD2P49448 558 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 SSRP1Q08945 709 aaKnown RBP22.87■■□□□ 1.25
VPS36-203ENST00000475375 LAMTOR4Q0VGL1 99 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 UBXN11Q5T124 520 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 TAS1R1Q7RTX1 841 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 BLIDQ8IZY5 108 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 SMG7Q92540 1137 aaKnown RBP22.87■■□□□ 1.25
VPS36-203ENST00000475375 PIDD1Q9HB75 910 aa22.87■■□□□ 1.25
VPS36-203ENST00000475375 KRBA1A5PL33 1030 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 EML1O00423 815 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 DKC1O60832 514 aaKnown RBP eCLIP22.86■■□□□ 1.25
VPS36-203ENST00000475375 RFPL2O75678 378 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 ERLIN2O94905 339 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 SPATA31D3P0C874 917 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 NCLP19338 710 aaKnown RBP22.86■■□□□ 1.25
VPS36-203ENST00000475375 PDIA3P30101 505 aaKnown RBP22.86■■□□□ 1.25
VPS36-203ENST00000475375 SPATA31D4Q6ZUB0 917 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 EXOC8Q8IYI6 725 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 ZNF579Q8NAF0 562 aaKnown RBP22.86■■□□□ 1.25
VPS36-203ENST00000475375 RIN2Q8WYP3 895 aaPredicted RBP22.86■■□□□ 1.25
VPS36-203ENST00000475375 TBC1D17Q9HA65 648 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 UBN1Q9NPG3 1134 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 MARCH5Q9NX47 278 aa22.86■■□□□ 1.25
VPS36-203ENST00000475375 EP300Q09472 2414 aaPredicted RBP22.86■■□□□ 1.25
VPS36-203ENST00000475375 LMNAP02545 664 aaKnown RBP22.85■■□□□ 1.25
VPS36-203ENST00000475375 RFC5P40937 340 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 INF2Q27J81 1249 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 SPECC1Q5M775 1068 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 MOXD1Q6UVY6 613 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms