RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 NLRP11P59045 1033 aaKnown RBP15.89■□□□□ 0.13
ATG9A-220ENST00000475339 MTAPQ13126 283 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 LRSAM1Q6UWE0 723 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 SPATA31D4Q6ZUB0 917 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 Q6ZUG5 572 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 CELF5Q8N6W0 485 aaKnown RBP15.89■□□□□ 0.13
ATG9A-220ENST00000475339 KDF1Q8NAX2 398 aaPredicted RBP15.89■□□□□ 0.13
ATG9A-220ENST00000475339 ZNF668Q96K58 619 aaPredicted RBP15.89■□□□□ 0.13
ATG9A-220ENST00000475339 GBP3Q9H0R5 595 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 MRPL17Q9NRX2 175 aaKnown RBP15.89■□□□□ 0.13
ATG9A-220ENST00000475339 KCNH7Q9NS40 1196 aa15.89■□□□□ 0.13
ATG9A-220ENST00000475339 SEC63Q9UGP8 760 aaKnown RBP15.89■□□□□ 0.13
ATG9A-220ENST00000475339 KLF18A0A0U1RQI7 1052 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 B4GALT3O60512 393 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 C22orf31O95567 290 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 ZNF484Q5JVG2 852 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 APOA5Q6Q788 366 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 LPPQ93052 612 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 RRP36Q96EU6 259 aaKnown RBP15.88■□□□□ 0.13
ATG9A-220ENST00000475339 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 INPP5FQ9Y2H2 1132 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
ATG9A-220ENST00000475339 COL1A2P08123 1366 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 GOLGA8AA7E2F4 631 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 BACH1O14867 736 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 TM4SF5O14894 197 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 TEX28O15482 410 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 ATG7O95352 703 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 ZIC2O95409 532 aaPredicted RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 GLUD1P00367 558 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 TDGF1P13385 188 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 FGFR4P22455 802 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 EIF4BP23588 611 aaKnown RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 AK2P54819 239 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 RNASELQ05823 741 aaKnown RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 RTN1Q16799 776 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 ELMSAN1Q6PJG2 1045 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 RSPO2Q6UXX9 243 aaPredicted RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 FANCBQ8NB91 859 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 BRF1Q92994 677 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 PHKBQ93100 1093 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 SPZ1Q9BXG8 430 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 NT5C3AQ9H0P0 336 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 ADAMTS10Q9H324 1103 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 FAM217BQ9NTX9 383 aaPredicted RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 RBM28Q9NW13 759 aaKnown RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 SDK1Q7Z5N4 2213 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 GCN1Q92616 2671 aaKnown RBP15.87■□□□□ 0.13
ATG9A-220ENST00000475339 RALGAPA1Q6GYQ0 2036 aa15.87■□□□□ 0.13
ATG9A-220ENST00000475339 MYH15Q9Y2K3 1946 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 IGKV6D-21A0A0A0MT36 114 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 CARNS1A5YM72 827 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 NCAM2O15394 837 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 PLEKHA8P1O95397 391 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 ADH1AP07327 375 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
ATG9A-220ENST00000475339 RPS9P46781 194 aaKnown RBP15.86■□□□□ 0.13
ATG9A-220ENST00000475339 CLCN3P51790 818 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 RING1Q06587 406 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 FZD5Q13467 585 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 NOMO2Q5JPE7 1267 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 TPRG1Q6ZUI0 275 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 TMTC3Q6ZXV5 915 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 RUFY3Q7L099 469 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
ATG9A-220ENST00000475339 ZNF280BQ86YH2 543 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 RPS6KC1Q96S38 1066 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 NELL2Q99435 816 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 DACT1Q9NYF0 836 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 DPP7Q9UHL4 492 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 LHX6Q9UPM6 363 aa15.86■□□□□ 0.13
ATG9A-220ENST00000475339 MEIS3P2A8K0S8 358 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 CCNE2O96020 404 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 ATP4AP20648 1035 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 SMARCA1P28370 1054 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 NRLP54845 237 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
ATG9A-220ENST00000475339 SIM2Q14190 667 aaPredicted RBP15.85■□□□□ 0.13
ATG9A-220ENST00000475339 PDXDC2PQ6P474 469 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 GLB1LQ6UWU2 654 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 CCDC60Q8IWA6 550 aaPredicted RBP15.85■□□□□ 0.13
ATG9A-220ENST00000475339 TM6SF1Q9BZW5 370 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 ZSWIM6Q9HCJ5 1215 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 BRPF3Q9ULD4 1205 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 NFASCO94856 1347 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 DOCK6Q96HP0 2047 aa15.85■□□□□ 0.13
ATG9A-220ENST00000475339 F5P12259 2224 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 SRRM3A6NNA2 597 aaPredicted RBP15.84■□□□□ 0.13
ATG9A-220ENST00000475339 CSDE1O75534 798 aaKnown RBP15.84■□□□□ 0.13
ATG9A-220ENST00000475339 PAPLNO95428 1278 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 URODP06132 367 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 FSHRP23945 695 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 PHKA2P46019 1235 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 RCAN1P53805 252 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 ANAPC15P60006 121 aa15.84■□□□□ 0.13
ATG9A-220ENST00000475339 PFKPQ01813 784 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms