RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 AGPAT5Q9NUQ2 364 aa14.13□□□□□ -0.15
SKA3-206ENST00000475251 NID2Q14112 1375 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 CCDC195A0A1B0GUA6 201 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 LILRB3O75022 631 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 NR1I2O75469 434 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 PSMD10O75832 226 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 GLUD1P00367 558 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 C1RP00736 705 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 CFHP08603 1231 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 SRFP11831 508 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 ADCK5Q3MIX3 580 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 Q4G0T1 1027 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
SKA3-206ENST00000475251 ZNF280BQ86YH2 543 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 HDAC7Q8WUI4 952 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 RPS6KC1Q96S38 1066 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 CEP89Q96ST8 783 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 HERC2P3Q9BVR0 1158 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 VN1R3Q9BXE9 311 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 SH3GLB2Q9NR46 395 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 EPS15L1Q9UBC2 864 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 PPME1Q9Y570 386 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 CLUHO75153 1309 aa14.12□□□□□ -0.15
SKA3-206ENST00000475251 RIF1Q5UIP0 2472 aaKnown RBP14.12□□□□□ -0.15
SKA3-206ENST00000475251 C2orf16Q68DN1 1984 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 MEIS3P2A8K0S8 358 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 NRP1O14786 923 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 ADAMTS3O15072 1205 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 INPPL1O15357 1258 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 DDHD2O94830 711 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 GLUD2P49448 558 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 AK2P54819 239 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 NLRP5P59047 1200 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 PSMC5P62195 406 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 AGMOQ6ZNB7 445 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 SRGAP1Q7Z6B7 1085 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 TBCKQ8TEA7 893 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
SKA3-206ENST00000475251 COL4A3BPQ9Y5P4 624 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 VPS13AQ96RL7 3174 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 SPTBN4Q9H254 2564 aa14.11□□□□□ -0.15
SKA3-206ENST00000475251 C2CD2LO14523 706 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 TEX28O15482 410 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 NARSO43776 548 aaKnown RBP14.1□□□□□ -0.15
SKA3-206ENST00000475251 NCLP19338 710 aaKnown RBP14.1□□□□□ -0.15
SKA3-206ENST00000475251 PCBP1Q15365 356 aaKnown RBP eCLIP14.1□□□□□ -0.15
SKA3-206ENST00000475251 BMP2KLQ5H9B9 411 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 PHLDB3Q6NSJ2 640 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 MOXD1Q6UVY6 613 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 Q6ZUG5 572 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 PSPC1Q8WXF1 523 aaKnown RBP14.1□□□□□ -0.15
SKA3-206ENST00000475251 SMG7Q92540 1137 aaKnown RBP14.1□□□□□ -0.15
SKA3-206ENST00000475251 BRF1Q92994 677 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 PHKBQ93100 1093 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 BORCS6Q96GS4 357 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 HINFPQ9BQA5 517 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 SLC26A6Q9BXS9 759 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 PLEKHA4Q9H4M7 779 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 TBC1D17Q9HA65 648 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 PIDD1Q9HB75 910 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 IFT122Q9HBG6 1241 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.1□□□□□ -0.15
SKA3-206ENST00000475251 VPS54Q9P1Q0 977 aa14.1□□□□□ -0.15
SKA3-206ENST00000475251 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 KRBA1A5PL33 1030 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 TMEM150BA6NC51 233 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 GAS2O43903 313 aaKnown RBP14.09□□□□□ -0.15
SKA3-206ENST00000475251 ERLIN2O94905 339 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 STBD1O95210 358 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 POMCP01189 267 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 ITGA4P13612 1032 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 IFNAR1P17181 557 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 CYP3A7P24462 503 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 RFC5P40937 340 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 OR1G1P47890 313 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 NCBP1Q09161 790 aaKnown RBP14.09□□□□□ -0.15
SKA3-206ENST00000475251 B3GNT9Q6UX72 402 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 ANO5Q75V66 913 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 DGLUCYQ7Z3D6 616 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 KSR1Q8IVT5 923 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 TRIM22Q8IYM9 498 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 FBXL16Q8N461 479 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 SLC44A3Q8N4M1 653 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 SH2D3AQ9BRG2 576 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 RXFP1Q9HBX9 757 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.15
SKA3-206ENST00000475251 ZDHHC7Q9NXF8 308 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 CA14Q9ULX7 337 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 PRG3Q9Y2Y8 225 aaPredicted RBP14.09□□□□□ -0.15
SKA3-206ENST00000475251 SIT1Q9Y3P8 196 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 ZFP37Q9Y6Q3 630 aaPredicted RBP14.09□□□□□ -0.15
SKA3-206ENST00000475251 DMDP11532 3685 aa14.09□□□□□ -0.15
SKA3-206ENST00000475251 ASAP2O43150 1006 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 B4GALT3O60512 393 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
SKA3-206ENST00000475251 PAPLNO95428 1278 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 AXLP30530 894 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms