RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
SSR1-205ENST00000475213 FSCN2O14926 492 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 TOB1P50616 345 aaPredicted RBP13.62□□□□□ -0.23
SSR1-205ENST00000475213 CAPSQ13938 189 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 TFDP1Q14186 410 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 CLUL1Q15846 466 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 EFCAB3Q8N7B9 438 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 CD320Q9NPF0 282 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
SSR1-205ENST00000475213 PER2O15055 1255 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
SSR1-205ENST00000475213 OFD1O75665 1012 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 ERLIN2O94905 339 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 GLRA2P23416 452 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 RPA1P27694 616 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 PPM1AP35813 382 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 NDUFV1P49821 464 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 POU5F1BQ06416 359 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 UBXN11Q5T124 520 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 PLPP4Q5VZY2 271 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 PDE12Q6L8Q7 609 aaKnown RBP13.61□□□□□ -0.23
SSR1-205ENST00000475213 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 GLB1LQ6UWU2 654 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 AGMOQ6ZNB7 445 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
SSR1-205ENST00000475213 SLC39A11Q8N1S5 342 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 ERMNQ8TAM6 284 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 RSPH1Q8WYR4 309 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 NACC1Q96RE7 527 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
SSR1-205ENST00000475213 TLE6Q9H808 572 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
SSR1-205ENST00000475213 DBR1Q9UK59 544 aaKnown RBP13.61□□□□□ -0.23
SSR1-205ENST00000475213 FAM50BQ9Y247 325 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 PCDHB6Q9Y5E3 794 aa13.61□□□□□ -0.23
SSR1-205ENST00000475213 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 INO80B-WBP1J3KQ70 363 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 MBTPS2O43462 519 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 TSPAN1O60635 241 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSR1-205ENST00000475213 GLP2RO95838 553 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 AXLP30530 894 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 ALDH7A1P49419 539 aaKnown RBP13.6□□□□□ -0.23
SSR1-205ENST00000475213 BCAR1P56945 870 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 KRT17Q04695 432 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 MBTD1Q05BQ5 628 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSR1-205ENST00000475213 MAEAQ7L5Y9 396 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 KHSRPQ92945 711 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSR1-205ENST00000475213 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 MSLNLQ96KJ4 702 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 GPRC5CQ9NQ84 441 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 ENTPD7Q9NQZ7 604 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 CLEC1BQ9P126 229 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 CD207Q9UJ71 328 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 KIF3AQ9Y496 699 aa13.6□□□□□ -0.23
SSR1-205ENST00000475213 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
SSR1-205ENST00000475213 HIDE1A8MVS5 230 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 NCLP19338 710 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 MUTP22033 750 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 GJB2P29033 226 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 RBM10P98175 930 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 PTGDRQ13258 359 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 SMAD2Q15796 467 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 ECM1Q16610 540 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 AMHR2Q16671 573 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 DUSP6Q16828 381 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 HAUS3Q68CZ6 603 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 TMC7Q7Z402 723 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 GJD3Q8N144 294 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 MCPH1Q8NEM0 835 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 CDCA3Q99618 268 aaPredicted RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 EPHX3Q9H6B9 360 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 NGRNQ9NPE2 291 aaKnown RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 LRWD1Q9UFC0 647 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 BARX2Q9UMQ3 279 aaPredicted RBP13.59□□□□□ -0.23
SSR1-205ENST00000475213 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
SSR1-205ENST00000475213 B4GALT3O60512 393 aa13.58□□□□□ -0.24
SSR1-205ENST00000475213 EYA4O95677 639 aa13.58□□□□□ -0.24
SSR1-205ENST00000475213 GALTP07902 379 aa13.58□□□□□ -0.24
SSR1-205ENST00000475213 ARF4P18085 180 aaPredicted RBP13.58□□□□□ -0.24
SSR1-205ENST00000475213 SSTR3P32745 418 aaPredicted RBP13.58□□□□□ -0.24
SSR1-205ENST00000475213 CCT6AP40227 531 aaKnown RBP13.58□□□□□ -0.24
SSR1-205ENST00000475213 MCM2P49736 904 aa13.58□□□□□ -0.24
SSR1-205ENST00000475213 AFF1P51825 1210 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms