RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 AKAP3O75969 853 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 C22orf31O95567 290 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 NR3C1P04150 777 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 AKR1A1P14550 325 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 INSRRP14616 1297 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 FECHP22830 423 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 NR2F2P24468 414 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 HOXD10P28358 340 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 RGS19P49795 217 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 CPT1AP50416 773 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 GSDMDP57764 484 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 PLCB2Q00722 1185 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 PRKCZQ05513 592 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 PPP2R3AQ06190 1150 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 ADAM9Q13443 819 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 MXD4Q14582 209 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 KIF22Q14807 665 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 ARID5BQ14865 1188 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 MAN2A1Q16706 1144 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 FILIP1LQ4L180 1135 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 BRDTQ58F21 947 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 FIGNQ5HY92 759 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 MARCH8Q5T0T0 291 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 SPECC1LQ69YQ0 1117 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 HS2ST1Q7LGA3 356 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 TLK2Q86UE8 772 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 NELFCDQ8IXH7 590 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 ASAP3Q8TDY4 903 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 IFT74Q96LB3 600 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 FBXL18Q96ME1 805 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 ERGIC2Q96RQ1 377 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 CCDC113Q9H0I3 377 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 POLR3FQ9H1D9 316 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 TMX1Q9H3N1 280 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 TUT1Q9H6E5 874 aaKnown RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 METTL14Q9HCE5 456 aaKnown RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 KMT5AQ9NQR1 393 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 MAGEC2Q9UBF1 373 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 ZNF215Q9UL58 517 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 DOCK5Q9H7D0 1870 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 DENND3A2RUS2 1198 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 MBLAC1A4D2B0 266 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 K7ENM7 598 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 N4BP3O15049 544 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 KIAA0391O15091 583 aaKnown RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 PMM2O15305 246 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ADCY3O60266 1144 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 FKTNO75072 461 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ADAMTS4O75173 837 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 GARTP22102 1010 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CST5P28325 142 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CNGA1P29973 690 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ADSSP30520 456 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 PSMC2P35998 433 aaKnown RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 EFNA5P52803 228 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 SOX10P56693 466 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 TBC1D8BQ0IIM8 1120 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 DRP2Q13474 957 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CAPSQ13938 189 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ARHGEF6Q15052 776 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 VWA3BQ502W6 1294 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 HSP90AA4PQ58FG1 418 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CCSAPQ6IQ19 270 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 SLC39A4Q6P5W5 647 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ZPBP2Q6X784 338 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 MAEAQ7L5Y9 396 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CCDC186Q7Z3E2 898 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 RETREG2Q8NC44 543 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 KLHDC9Q8NEP7 349 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ZNF296Q8WUU4 475 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 PRPF31Q8WWY3 499 aaKnown RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 PSPC1Q8WXF1 523 aaKnown RBP7.25□□□□□ -1.25
ATG4A-207ENST00000474825 TMEM143Q96AN5 459 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 IQCDQ96DY2 449 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ERO1AQ96HE7 468 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 TTYH3Q9C0H2 523 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 VPS16Q9H269 839 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 NDST4Q9H3R1 872 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 FZD8Q9H461 694 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 TAB2Q9NYJ8 693 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 EXOC7Q9UPT5 735 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 SIK3Q9Y2K2 1263 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 CENPFP49454 3210 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 NRCAMQ92823 1304 aa7.25□□□□□ -1.25
ATG4A-207ENST00000474825 ARID2Q68CP9 1835 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 MGAMO43451 1857 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 SMIM35A0A1B0GVV1 85 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 A0A1W2PQJ5 194 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 GTPBP10A4D1E9 387 aaKnown RBP7.24□□□□□ -1.25
ATG4A-207ENST00000474825 ANKRD63C9JTQ0 380 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 MSCO60682 206 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 KLRC1P26715 233 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 MARK3P27448 753 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 MTIF2P46199 727 aaKnown RBP7.24□□□□□ -1.25
ATG4A-207ENST00000474825 KCNJ6P48051 423 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 CASP4P49662 377 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 PTENP60484 403 aa7.24□□□□□ -1.25
ATG4A-207ENST00000474825 PURAQ00577 322 aaKnown RBP7.24□□□□□ -1.25
ATG4A-207ENST00000474825 CDC42EP1Q00587 391 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms