RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 EVPLQ92817 2033 aa21.58■■□□□ 1.05
SSR1-204ENST00000474597 H3BRB1 525 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 N4BP1O75113 896 aaKnown RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 NOL4O94818 638 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 INSRRP14616 1297 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 PON1P27169 355 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 CYP2C19P33261 490 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 CYLC1P35663 651 aaPredicted RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 EFNA5P52803 228 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 FCGRTP55899 365 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 MYL7Q01449 175 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 CETN1Q12798 172 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 TFDP1Q14186 410 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 SNRNP35Q16560 246 aaKnown RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 PDXDC1Q6P996 788 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 NYAP1Q6ZVC0 841 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 BAP1Q92560 729 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 C16orf70Q9BSU1 422 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 TUT1Q9H6E5 874 aaKnown RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 GJD2Q9UKL4 321 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 ADGRG1Q9Y653 693 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 KAT6AQ92794 2004 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 MAGEB2O15479 319 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 DYNC1LI2O43237 492 aaPredicted RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 SRGAP2CP0DJJ0 459 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 HNRNPH3P31942 346 aaKnown RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 CDK17Q00537 523 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 HSP90AA2PQ14568 343 aaPredicted RBP21.57■■□□□ 1.04
SSR1-204ENST00000474597 USP37Q86T82 979 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 RHPN2Q8IUC4 686 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 REXO1L1PQ8IX06 675 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 GPD1LQ8N335 351 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 C2orf40Q9H1Z8 148 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 GANQ9H2C0 597 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 COL1A2P08123 1366 aa21.57■■□□□ 1.04
SSR1-204ENST00000474597 ACTN1P12814 892 aa21.56■■□□□ 1.04
SSR1-204ENST00000474597 MATR3P43243 847 aaKnown RBP eCLIP21.56■■□□□ 1.042e-7■■■■□ 19.4
SSR1-204ENST00000474597 SFMBT2Q5VUG0 894 aa21.56■■□□□ 1.04
SSR1-204ENST00000474597 SLFN12LQ6IEE8 588 aa21.56■■□□□ 1.04
SSR1-204ENST00000474597 CCDC170Q8IYT3 715 aa21.56■■□□□ 1.04
SSR1-204ENST00000474597 RNF149Q8NC42 400 aa21.56■■□□□ 1.04
SSR1-204ENST00000474597 ZSWIM2Q8NEG5 633 aa21.56■■□□□ 1.04
SSR1-204ENST00000474597 EPN1Q9Y6I3 576 aaPredicted RBP21.56■■□□□ 1.04
SSR1-204ENST00000474597 KIAA0391O15091 583 aaKnown RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 ASAP2O43150 1006 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 NDUFA10O95299 355 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 IPO7O95373 1038 aaKnown RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 PIGRP01833 764 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 ZNF865P0CJ78 1059 aaPredicted RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 MKRN4PQ13434 485 aaPredicted RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 CBWD6Q4V339 395 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 CBWD3Q5JTY5 395 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 CBWD5Q5RIA9 395 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 KLHDC7AQ5VTJ3 777 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 TLK2Q86UE8 772 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 CBWD2Q8IUF1 395 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 ZNF592Q92610 1267 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 SPAG5Q96R06 1193 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 NHEJ1Q9H9Q4 299 aaPredicted RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 KIAA1586Q9HCI6 787 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 R3HCC1Q9Y3T6 440 aaKnown RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 ADCY6O43306 1168 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 C22orf31O95567 290 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 TUBB4AP04350 444 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 HOXD8P13378 290 aaPredicted RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 UCHL3P15374 230 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 KLRC1P26715 233 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 PSMC4P43686 418 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 CLCN3P51790 818 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 DLG4P78352 724 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 APBA1Q02410 837 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 DEFB115Q30KQ5 88 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 SYN2Q92777 582 aaPredicted RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 CCDC42Q96M95 316 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 NLRP4Q96MN2 994 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 DEF6Q9H4E7 631 aa21.55■■□□□ 1.04
SSR1-204ENST00000474597 GNEQ9Y223 722 aaKnown RBP21.55■■□□□ 1.04
SSR1-204ENST00000474597 ADRB2P07550 413 aa21.54■■□□□ 1.04
SSR1-204ENST00000474597 TMOD1P28289 359 aa21.54■■□□□ 1.04
SSR1-204ENST00000474597 RAPGEF1Q13905 1077 aa21.54■■□□□ 1.04
SSR1-204ENST00000474597 CDCA2Q69YH5 1023 aaPredicted RBP21.54■■□□□ 1.04
SSR1-204ENST00000474597 ACRBPQ8NEB7 543 aa21.54■■□□□ 1.04
SSR1-204ENST00000474597 FBXL18Q96ME1 805 aa21.54■■□□□ 1.04
SSR1-204ENST00000474597 FAM213AQ9BRX8 229 aa21.54■■□□□ 1.04
SSR1-204ENST00000474597 TARS2Q9BW92 718 aaKnown RBP21.54■■□□□ 1.04
SSR1-204ENST00000474597 ZNF233A6NK53 670 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 P4HA2O15460 535 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 EXTL3O43909 919 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 PPFIA1Q13136 1202 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 MAPK6Q16659 721 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 TRIM65Q6PJ69 517 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 REM2Q8IYK8 340 aaPredicted RBP21.53■■□□□ 1.04
SSR1-204ENST00000474597 MRPL4Q9BYD3 311 aaKnown RBP21.53■■□□□ 1.04
SSR1-204ENST00000474597 AP5M1Q9H0R1 490 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 FBXL5Q9UKA1 691 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 AGO2Q9UKV8 859 aaKnown RBP21.53■■□□□ 1.04
SSR1-204ENST00000474597 STYXL1Q9Y6J8 313 aa21.53■■□□□ 1.04
SSR1-204ENST00000474597 AOC2O75106 756 aa21.52■■□□□ 1.04
SSR1-204ENST00000474597 LDHAP00338 332 aaKnown RBP21.52■■□□□ 1.04
SSR1-204ENST00000474597 PRKCBP05771 671 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms