RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 NFKBIZQ9BYH8 718 aa17.7■□□□□ 0.42
ITGB1-210ENST00000474568 LMAN2LQ9H0V9 348 aa17.7■□□□□ 0.42
ITGB1-210ENST00000474568 IPPQ9Y573 584 aa17.7■□□□□ 0.42
ITGB1-210ENST00000474568 TTLL13PA6NNM8 815 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 DLL1O00548 723 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 ZNF623O75123 536 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 OFD1O75665 1012 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 PRKCBP05771 671 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 ITGA4P13612 1032 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 AXLP30530 894 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 UBA7P41226 1012 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 NAMPTP43490 491 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 KCNQ1P51787 676 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 AFF1P51825 1210 aaKnown RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 MRPS5P82675 430 aaKnown RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 PTPAQ15257 358 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 TMEM119Q4V9L6 283 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 NOMO2Q5JPE7 1267 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 HYIQ5T013 277 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 KCNT2Q6UVM3 1135 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 MRPL10Q7Z7H8 261 aaKnown RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 KIFAP3Q92845 792 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 MRPL9Q9BYD2 267 aaKnown RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 TRIM6Q9C030 488 aaPredicted RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 NT5C3AQ9H0P0 336 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 CSRNP2Q9H175 543 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 C2orf40Q9H1Z8 148 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 IGFLR1Q9H665 355 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 RSAD1Q9HA92 442 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 PRMT7Q9NVM4 692 aaPredicted RBP17.69■□□□□ 0.42
ITGB1-210ENST00000474568 TRANK1O15050 2925 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 NLRC5Q86WI3 1866 aa17.69■□□□□ 0.42
ITGB1-210ENST00000474568 NPHP3-ACAD11A0A0J9YXS1 232 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 SFI1A8K8P3 1242 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 ZC3H11AO75152 810 aaKnown RBP eCLIP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 EDN1P05305 212 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 LONP1P36776 959 aaKnown RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 PEX3P56589 373 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 RNASELQ05823 741 aaKnown RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 PPP2R5AQ15172 486 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 TJAP1Q5JTD0 557 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 C1orf186Q6ZWK4 172 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 ADGRD2Q7Z7M1 963 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 DAW1Q8N136 415 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 MICAL1Q8TDZ2 1067 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 CCDC51Q96ER9 411 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 CALML4Q96GE6 196 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 AK8Q96MA6 479 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 CLIC6Q96NY7 704 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 ASB2Q96Q27 587 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 USP28Q96RU2 1077 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 COL25A1Q9BXS0 654 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 NXF3Q9H4D5 531 aaKnown RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-210ENST00000474568 TBC1D13Q9NVG8 400 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 COG5Q9UP83 839 aa17.68■□□□□ 0.42
ITGB1-210ENST00000474568 RALGAPA2Q2PPJ7 1873 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 FNDC1Q4ZHG4 1894 aaPredicted RBP17.67■□□□□ 0.42
ITGB1-210ENST00000474568 POMCP01189 267 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 PLCG1P19174 1290 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 KCNA5P22460 613 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 AKAP5P24588 427 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 GTF2F1P35269 517 aaKnown RBP eCLIP17.67■□□□□ 0.421e-12■■■■■ 49.4
ITGB1-210ENST00000474568 BCAR1P56945 870 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 PRPF4BQ13523 1007 aaKnown RBP17.67■□□□□ 0.42
ITGB1-210ENST00000474568 MAPK6Q16659 721 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 PPP4R3CPQ6ZMV5 832 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 RBM23Q86U06 439 aaKnown RBP17.67■□□□□ 0.42
ITGB1-210ENST00000474568 URGCPQ8TCY9 931 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 LRRC15Q8TF66 581 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 FZD8Q9H461 694 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 ZSCAN16Q9H4T2 348 aaPredicted RBP17.67■□□□□ 0.42
ITGB1-210ENST00000474568 NRDE2Q9H7Z3 1164 aa17.67■□□□□ 0.42
ITGB1-210ENST00000474568 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 B4GALT3O60512 393 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 MLH1P40692 756 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 NPTX2P47972 431 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 SLC12A3P55017 1021 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 ERVFC1P60507 584 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 HYAL1Q12794 435 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 MAPK7Q13164 816 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 PLPP4Q5VZY2 271 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 SLC27A1Q6PCB7 646 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 USP49Q70CQ1 688 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 ZNF280BQ86YH2 543 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 SLC39A11Q8N1S5 342 aa17.66■□□□□ 0.42
ITGB1-210ENST00000474568 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
ITGB1-210ENST00000474568 EPSTI1Q96J88 318 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms