RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 NIPSNAP2O75323 286 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 IDH1O75874 414 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 KCNH1O95259 989 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 KELP23276 732 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 AMPHP49418 695 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CLNS1AP54105 237 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 BPIFB4P59827 614 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 PDE3AQ14432 1141 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MAPRE2Q15555 327 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 OCLNQ16625 522 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CCDC153Q494R4 210 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 OLFM4Q6UX06 510 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 HEATR4Q86WZ0 1026 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MOSPD2Q8NHP6 518 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 NUDCD1Q96RS6 583 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TESK2Q96S53 571 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TCF25Q9BQ70 676 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.76□□□□□ -1.81
UBR3-208ENST00000474426 STMN4Q9H169 189 aaPredicted RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 ANTXR1Q9H6X2 564 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ATP13A3Q9H7F0 1226 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 C12orf10Q9HB07 376 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CHORDC1Q9UHD1 332 aaPredicted RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 TRPS1Q9UHF7 1281 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ANAPC5Q9UJX4 755 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ZBTB1Q9Y2K1 713 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CAB39Q9Y376 341 aaPredicted RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 SNPHO15079 494 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SRGAP2O75044 1071 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 LGR5O75473 907 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 EGFRP00533 1210 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 HLA-DRAP01903 254 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 PABPC4LP0CB38 370 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 DLATP10515 647 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 CKBP12277 381 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MYL4P12829 197 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 MAPKAPK2P49137 400 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 GNAQP50148 359 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TUBP50607 506 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 DCAF7P61962 342 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CSNK2BP67870 215 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 LIPEQ05469 1076 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ZBTB16Q05516 673 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 HIC1Q14526 733 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SPCS2Q15005 226 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 FBXO48Q5FWF7 155 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SIGIRRQ6IA17 410 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 C8orf74Q6P047 294 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 KLC3Q6P597 504 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 DRICH1Q6PGQ1 229 aaPredicted RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 C11orf88Q6PI97 169 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TXNDC11Q6PKC3 985 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 RGS9BPQ6ZS82 235 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 EPM2AIP1Q7L775 607 aaPredicted RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 GPR155Q7Z3F1 870 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CAMKK1Q8N5S9 505 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 OR52K1Q8NGK4 314 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ZNF507Q8TCN5 953 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 CHAC2Q8WUX2 184 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 METTL21AQ8WXB1 218 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 ZNF566Q969W8 418 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 HES6Q96HZ4 224 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 RUNDC3BQ96NL0 473 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SLC26A6Q9BXS9 759 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TRIM55Q9BYV6 548 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TFB2MQ9H5Q4 396 aaKnown RBP3.76□□□□□ -1.81
UBR3-208ENST00000474426 UCK1Q9HA47 277 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 WASH6PQ9NQA3 447 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 C8orf4Q9NR00 106 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 EMILIN3Q9NT22 766 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 TBC1D14Q9P2M4 693 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 SEPT3Q9UH03 358 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 PTPRCP08575 1304 aa3.76□□□□□ -1.81
UBR3-208ENST00000474426 RGSL1A5PLK6 1076 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 FAM196BA6NMK8 535 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 B4E171 279 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TARM1B6A8C7 271 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 AP3D1O14617 1153 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 IKBKBO14920 756 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 MAGEB3O15480 346 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PAPLNO95428 1278 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TBC1D8O95759 1140 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 IVLP07476 585 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PHKG2P15735 406 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PRKACAP17612 351 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 GAP43P17677 238 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CASTP20810 708 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 MCM4P33991 863 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZNF445P59923 1031 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TUBA4AP68366 448 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ST5P78524 1137 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TMPRSS15P98073 1019 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 GCNT1Q02742 428 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 FKBP5Q13451 457 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 CUL1Q13616 776 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CCINQ13939 588 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 MYLK3Q32MK0 819 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 IFFO2Q5TF58 517 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 NLRC3Q7RTR2 1065 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TSPYL5Q86VY4 417 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms