RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 TUFT1Q9NNX1 390 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 INPP5FQ9Y2H2 1132 aa17.57■□□□□ 0.4
CDPF1-205ENST00000474256 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
CDPF1-205ENST00000474256 CNTNAP2Q9UHC6 1331 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 A0A087WWV3 80 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 FAM86C2PA6NEL3 165 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 C2orf71A6NGG8 1288 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 DCXO43602 365 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 TSPAN1O60635 241 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 MED24O75448 989 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 ERLIN2O94905 339 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 NCLP19338 710 aaKnown RBP17.56■□□□□ 0.4
CDPF1-205ENST00000474256 GLRA2P23416 452 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 TECP42680 631 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 AFF1P51825 1210 aaKnown RBP17.56■□□□□ 0.4
CDPF1-205ENST00000474256 MBTD1Q05BQ5 628 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 CAPSQ13938 189 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 SMC1AQ14683 1233 aaKnown RBP17.56■□□□□ 0.4
CDPF1-205ENST00000474256 ZNF174Q15697 407 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 AMHR2Q16671 573 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 ZNF280BQ86YH2 543 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 FAM184AQ8NB25 1140 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 SMG8Q8ND04 991 aaKnown RBP17.56■□□□□ 0.4
CDPF1-205ENST00000474256 CNNM3Q8NE01 707 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 SUSD6Q92537 303 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 IGSF21Q96ID5 467 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 CCDC43Q96MW1 224 aaKnown RBP17.56■□□□□ 0.4
CDPF1-205ENST00000474256 POLR3CQ9BUI4 534 aaPredicted RBP17.56■□□□□ 0.4
CDPF1-205ENST00000474256 S1PR5Q9H228 398 aa17.56■□□□□ 0.4
CDPF1-205ENST00000474256 INO80B-WBP1J3KQ70 363 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 B4GALT3O60512 393 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 SRGAP2BP0DMP2 458 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 RNASELQ05823 741 aaKnown RBP17.55■□□□□ 0.4
CDPF1-205ENST00000474256 TTC38Q5R3I4 469 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 ANKRD54Q6NXT1 300 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 NOTUMQ6P988 496 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 DDX53Q86TM3 631 aaKnown RBP17.55■□□□□ 0.4
CDPF1-205ENST00000474256 VPS52Q8N1B4 723 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 URGCPQ8TCY9 931 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 BCL7CQ8WUZ0 217 aaPredicted RBP17.55■□□□□ 0.4
CDPF1-205ENST00000474256 CCDC51Q96ER9 411 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 ZBP1Q9H171 429 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 UBN1Q9NPG3 1134 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 KANSL3Q9P2N6 904 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 DNAJB4Q9UDY4 337 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
CDPF1-205ENST00000474256 IRAK3Q9Y616 596 aa17.55■□□□□ 0.4
CDPF1-205ENST00000474256 PRR33A8MZF0 331 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 LOC730098B7Z3J9 87 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 INPPL1O15357 1258 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 USO1O60763 962 aaKnown RBP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 DDHD2O94830 711 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 U2AF2P26368 475 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 RPA1P27694 616 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 SLC11A1P49279 550 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 NCBP1Q09161 790 aaKnown RBP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 SYCE2Q6PIF2 218 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 C4orf32Q8N8J7 132 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 ERMNQ8TAM6 284 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 CPB2Q96IY4 423 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 PHF7Q9BWX1 381 aaPredicted RBP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 EIF2AQ9BY44 585 aaKnown RBP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 POLR3FQ9H1D9 316 aaPredicted RBP17.54■□□□□ 0.4
CDPF1-205ENST00000474256 IPPQ9Y573 584 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 HCFC2Q9Y5Z7 792 aa17.54■□□□□ 0.4
CDPF1-205ENST00000474256 CLASP2O75122 1294 aaKnown RBP17.53■□□□□ 0.4
CDPF1-205ENST00000474256 CXCL14O95715 111 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 CTSAP10619 480 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 ITGA4P13612 1032 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 HOXB8P17481 243 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-205ENST00000474256 ARF4P18085 180 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-205ENST00000474256 GNL2Q13823 731 aaKnown RBP17.53■□□□□ 0.4
CDPF1-205ENST00000474256 CBX2Q14781 532 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-205ENST00000474256 RABEP1Q15276 862 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 HERC4Q5GLZ8 1057 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-205ENST00000474256 LLGL2Q6P1M3 1020 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 RNF135Q8IUD6 432 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 MCPH1Q8NEM0 835 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 TMEM175Q9BSA9 504 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 VN1R3Q9BXE9 311 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 GBP3Q9H0R5 595 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 GPRC5CQ9NQ84 441 aa17.53■□□□□ 0.4
CDPF1-205ENST00000474256 MUTP22033 750 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 FXR2P51116 673 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDPF1-205ENST00000474256 GIT2Q14161 759 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 POTEGQ6S5H5 508 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 MAEAQ7L5Y9 396 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 CASP10Q92851 521 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 STK39Q9UEW8 545 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 MUTYHQ9UIF7 546 aa17.52■□□□□ 0.4
CDPF1-205ENST00000474256 NOL7Q9UMY1 257 aaKnown RBP17.52■□□□□ 0.4
CDPF1-205ENST00000474256 ARID2Q68CP9 1835 aa17.51■□□□□ 0.39
CDPF1-205ENST00000474256 A0A1B0GUA9 196 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms