RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TRIM75PA6NK02 468 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 GOLGA8AA7E2F4 631 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 GOLGA8BA8MQT2 603 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 B4GALT4O60513 344 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 SEC24DO94855 1032 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 JUNP05412 331 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 ZNF888P0CJ79 500 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 MCM7P33993 719 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 STAT5BP51692 787 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 WNT3AP56704 352 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 ERVK-21P61565 698 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 PPARAQ07869 468 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 HS1BP3Q53T59 392 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 SYDE2Q5VT97 1194 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 CCDC62Q6P9F0 684 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 GPR155Q7Z3F1 870 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 BCL6BQ8N143 479 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 CNTD1Q8N815 330 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 NEU4Q8WWR8 484 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 GNRHR2Q96P88 292 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 UIMC1Q96RL1 719 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 LMF1Q96S06 567 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 C14orf119Q9NWQ9 140 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 PRSS50Q9UI38 385 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 MRFAP1Q9Y605 127 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 CDY2AQ9Y6F7 541 aa4.46□□□□□ -1.7
ECHDC1-213ENST00000474240 CNOT4O95628 575 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 VSIG10L2P0DP72 767 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 RRADP55042 308 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 INHBCP55103 352 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 EXOSC10Q01780 885 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 USP39Q53GS9 565 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 PITRM1Q5JRX3 1037 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 UNQ6494/PRO21346Q6UXR6 183 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 LARP4Q71RC2 724 aaKnown RBP eCLIP4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 CLEC14AQ86T13 490 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 ANKRD13AQ8IZ07 590 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 RABGGTAQ92696 567 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 ZG16BQ96DA0 208 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 NEIL1Q96FI4 390 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 ANO3Q9BYT9 981 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 KCTD10Q9H3F6 313 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 ZBTB21Q9ULJ3 1066 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 OAZ3Q9UMX2 235 aa4.45□□□□□ -1.7
ECHDC1-213ENST00000474240 SHTN1A0MZ66 631 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 SLC26A4O43511 780 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 FOXS1O43638 330 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 PHF2O75151 1096 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 CR2P20023 1033 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 IL12RB1P42701 662 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 CDKN1CP49918 316 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 ATXN1P54253 815 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 HGFACQ04756 655 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 ITKQ08881 620 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 TCIRG1Q13488 830 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 PDCD1Q15116 288 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 LSM12Q3MHD2 195 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 LHFPL2Q6ZUX7 228 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 PLA2G15Q8NCC3 412 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 FATE1Q969F0 183 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 VOPP1Q96AW1 172 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 MTMR8Q96EF0 704 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 KIAA1683Q9H0B3 1180 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 DNAI1Q9UI46 699 aa4.44□□□□□ -1.7
ECHDC1-213ENST00000474240 LTA4HP09960 611 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 GAAP10253 952 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 KIR2DL3P43628 341 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 ADCY7P51828 1080 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 LGALS4P56470 323 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 SCAND1P57086 179 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 ANTXR2P58335 489 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 ADAM15Q13444 863 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 RNF151Q2KHN1 245 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 MUM1Q2TAK8 710 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 C19orf54Q5BKX5 351 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 CT83Q5H943 113 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 KRT40Q6A162 431 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 TCTN3Q6NUS6 607 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 DPY19L2P1Q6NXN4 242 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 SLC41A1Q8IVJ1 513 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 COG1Q8WTW3 980 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 EAF2Q96CJ1 260 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 GPATCH3Q96I76 525 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 FAM126AQ9BYI3 521 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 SLC13A1Q9BZW2 595 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 C12orf65Q9H3J6 166 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 MS4A5Q9H3V2 200 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 CCM2LQ9NUG4 571 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 DNAJC28Q9NX36 388 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 TMPRSS11EQ9UL52 423 aa4.43□□□□□ -1.7
ECHDC1-213ENST00000474240 CDC14BO60729 498 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 LY86O95711 162 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 GASTP01350 101 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 CLEC2LP0C7M8 214 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 RBP3P10745 1247 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 GYPEP15421 78 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 GPR3P46089 330 aa4.42□□□□□ -1.7
ECHDC1-213ENST00000474240 BPIFB4P59827 614 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms