RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
VAMP4-203ENST00000474047 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
VAMP4-203ENST00000474047 FOXD4L3Q6VB84 417 aaPredicted RBP15.7■□□□□ 0.1
VAMP4-203ENST00000474047 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.7■□□□□ 0.1
VAMP4-203ENST00000474047 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
VAMP4-203ENST00000474047 URGCPQ8TCY9 931 aa15.7■□□□□ 0.1
VAMP4-203ENST00000474047 P2RX5Q93086 422 aa15.7■□□□□ 0.1
VAMP4-203ENST00000474047 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
VAMP4-203ENST00000474047 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
VAMP4-203ENST00000474047 SRPRBQ9Y5M8 271 aaKnown RBP15.7■□□□□ 0.1
VAMP4-203ENST00000474047 B4GALT5O43286 388 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 PRKCBP05771 671 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
VAMP4-203ENST00000474047 ITGA4P13612 1032 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 CDCA2Q69YH5 1023 aaPredicted RBP15.69■□□□□ 0.1
VAMP4-203ENST00000474047 C1orf186Q6ZWK4 172 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 KRI1Q8N9T8 703 aaKnown RBP15.69■□□□□ 0.1
VAMP4-203ENST00000474047 COLGALT1Q8NBJ5 622 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 RSPH1Q8WYR4 309 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 ZNF558Q96NG5 402 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 APOL6Q9BWW8 343 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 LMAN2LQ9H0V9 348 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 KMT5AQ9NQR1 393 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 RNF19AQ9NV58 838 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 KCND2Q9NZV8 630 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 KCNG1Q9UIX4 513 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 FBXO2Q9UK22 296 aaPredicted RBP15.69■□□□□ 0.1
VAMP4-203ENST00000474047 PLAGL2Q9UPG8 496 aa15.69■□□□□ 0.1
VAMP4-203ENST00000474047 SFI1A8K8P3 1242 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 K7ERI5 159 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 GRM6O15303 877 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 F13A1P00488 732 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 LINC00271P0C7V0 271 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 PLCG1P19174 1290 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 TIGD5Q53EQ6 642 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 NOMO2Q5JPE7 1267 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 SLC27A1Q6PCB7 646 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 EPSTI1Q96J88 318 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 CLIC6Q96NY7 704 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 KIFC3Q9BVG8 833 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 EIF2AQ9BY44 585 aaKnown RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 RSAD1Q9HA92 442 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 C17orf75Q9HAS0 396 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 UBN1Q9NPG3 1134 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 DAXXQ9UER7 740 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 IPPQ9Y573 584 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 CNTNAP2Q9UHC6 1331 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 NPTXRO95502 500 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 ITGB1P05556 798 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 ALDH7A1P49419 539 aaKnown RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 SMTNP53814 917 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 KRT17Q04695 432 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 AMHR2Q16671 573 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 FAM187BQ17R55 369 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 LRRC55Q6ZSA7 311 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 MRPL10Q7Z7H8 261 aaKnown RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 GPBP1Q86WP2 473 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 CDR2LQ86X02 465 aaPredicted RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 SYMPKQ92797 1274 aaKnown RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 GBP3Q9H0R5 595 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 FZD8Q9H461 694 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 CWH43Q9H720 699 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 THEGQ9P2T0 379 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 HCSTQ9UBK5 93 aa15.68■□□□□ 0.1
VAMP4-203ENST00000474047 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
VAMP4-203ENST00000474047 CHD7Q9P2D1 2997 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 A0A1B0GUA9 196 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 MEIS3P2A8K0S8 358 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 ACKR2O00590 384 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 N4BP3O15049 544 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 SPTLC2O15270 562 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 OFD1O75665 1012 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 NPTX2P47972 431 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
VAMP4-203ENST00000474047 MCM6Q14566 821 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 RRAGBQ5VZM2 374 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 KCNT2Q6UVM3 1135 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 AGMOQ6ZNB7 445 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 APBB1IPQ7Z5R6 666 aaPredicted RBP15.67■□□□□ 0.1
VAMP4-203ENST00000474047 RAD54LQ92698 747 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 PRDM6Q9NQX0 595 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 KANSL3Q9P2N6 904 aa15.67■□□□□ 0.1
VAMP4-203ENST00000474047 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
VAMP4-203ENST00000474047 ZC3H11AO75152 810 aaKnown RBP eCLIP15.66■□□□□ 0.1
VAMP4-203ENST00000474047 FGF18O76093 207 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 PPM1AP35813 382 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 EP400NLQ6ZTU2 488 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 LINC00301Q8NCQ3 95 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 SMG8Q8ND04 991 aaKnown RBP15.66■□□□□ 0.1
VAMP4-203ENST00000474047 SPPL3Q8TCT6 385 aa15.66■□□□□ 0.1
VAMP4-203ENST00000474047 POF1BQ8WVV4 589 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms