RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 TBC1D22BQ9NU19 505 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 ZSCAN32Q9NX65 697 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 STK39Q9UEW8 545 aa18.29■□□□□ 0.52
HPS4-210ENST00000473782 SMCO2A6NFE2 343 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 SHISA7A6NL88 538 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 F8W810 466 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 EDIL3O43854 480 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 GLUD1P00367 558 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 ALDH2P05091 517 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 ZNF76P36508 570 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 ADCY7P51828 1080 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 NAPAP54920 295 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 AP3B2Q13367 1082 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 FZD5Q13467 585 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 LILRA6Q6PI73 481 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 TSSK4Q6SA08 328 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
HPS4-210ENST00000473782 HDAC7Q8WUI4 952 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 FAM167AQ96KS9 214 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 TMEM175Q9BSA9 504 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
HPS4-210ENST00000473782 PIN4Q9Y237 131 aaKnown RBP18.28■□□□□ 0.52
HPS4-210ENST00000473782 FAN1Q9Y2M0 1017 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 DOCK6Q96HP0 2047 aa18.28■□□□□ 0.52
HPS4-210ENST00000473782 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 CCDC69A6NI79 296 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 FAM170BA6NMN3 283 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 STBD1O95210 358 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 ADH1AP07327 375 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 SKIP12755 728 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 CD72P21854 359 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 LIFRP42702 1097 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 PRKCEQ02156 737 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 MLF2Q15773 248 aaPredicted RBP18.27■□□□□ 0.52
HPS4-210ENST00000473782 SLC44A4Q53GD3 710 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 PPP1R18Q6NYC8 613 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 NFXL1Q6ZNB6 911 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 TMTC2Q8N394 836 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 MAP4K1Q92918 833 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 CLDN23Q96B33 292 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 LENG9Q96B70 501 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 SHDQ96IW2 340 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 SCLT1Q96NL6 688 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 BCO2Q9BYV7 579 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 OSBPL6Q9BZF3 934 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 PRKD2Q9BZL6 878 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 LTB4R2Q9NPC1 389 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 CHST7Q9NS84 486 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 PCDHB2Q9Y5E7 798 aa18.27■□□□□ 0.52
HPS4-210ENST00000473782 MIA3Q5JRA6 1907 aa18.27■□□□□ 0.51
HPS4-210ENST00000473782 WDR81Q562E7 1941 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 TGM5O43548 720 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 URODP06132 367 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 CALM1P0DP23 149 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 CALM2P0DP24 149 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 CALM3P0DP25 149 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 TDGF1P13385 188 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 CHMLP26374 656 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 DSG1Q02413 1049 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 PPM1JQ5JR12 505 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 UBXN11Q5T124 520 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 JAKMIP3Q5VZ66 844 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 COLGALT2Q8IYK4 626 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 PRMT8Q9NR22 394 aaPredicted RBP18.26■□□□□ 0.51
HPS4-210ENST00000473782 NRBP2Q9NSY0 501 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 ZZEF1O43149 2961 aa18.26■□□□□ 0.51
HPS4-210ENST00000473782 FAM208BQ5VWN6 2430 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 SPEGQ15772 3267 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 TMEM150BA6NC51 233 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 SLC30A4O14863 429 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 TBC1D4O60343 1298 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 PRKCQQ04759 706 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 PALB2Q86YC2 1186 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 KSR1Q8IVT5 923 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 TMEM87BQ96K49 555 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 LRRC2Q9BYS8 371 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 PLEKHA4Q9H4M7 779 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 ZDHHC7Q9NXF8 308 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 BARHL2Q9NY43 387 aa18.25■□□□□ 0.51
HPS4-210ENST00000473782 PRG3Q9Y2Y8 225 aaPredicted RBP18.25■□□□□ 0.51
HPS4-210ENST00000473782 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.25■□□□□ 0.51
HPS4-210ENST00000473782 MYH15Q9Y2K3 1946 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 SGSM2O43147 1006 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
HPS4-210ENST00000473782 C1RP00736 705 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 POMCP01189 267 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 SFPQP23246 707 aaKnown RBP eCLIP18.24■□□□□ 0.51
HPS4-210ENST00000473782 TARSP26639 723 aaKnown RBP18.24■□□□□ 0.51
HPS4-210ENST00000473782 HOXA11P31270 313 aaPredicted RBP18.24■□□□□ 0.51
HPS4-210ENST00000473782 RAB27AP51159 221 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 NTHL1P78549 312 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 COL9A2Q14055 689 aaPredicted RBP18.24■□□□□ 0.51
HPS4-210ENST00000473782 B3GALT6Q96L58 329 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 SH2D3AQ9BRG2 576 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 NIFKQ9BYG3 293 aaKnown RBP18.24■□□□□ 0.51
HPS4-210ENST00000473782 RSAD1Q9HA92 442 aa18.24■□□□□ 0.51
HPS4-210ENST00000473782 PIDD1Q9HB75 910 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms